RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 TCF7P36402 384 aaPredicted RBP2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 TMPOP42166 694 aaKnown RBP2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 CTSKP43235 329 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 TNFRSF4P43489 277 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 QARSP47897 775 aaKnown RBP2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 LIMS1P48059 325 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 ARRB1P49407 418 aaPredicted RBP2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 COPB1P53618 953 aaKnown RBP2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 C21orf59P57076 290 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 KRTAP10-2P60368 255 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 CYP4A11Q02928 519 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 RESTQ13127 1097 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 PDGFRLQ15198 375 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 SHBQ15464 509 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 CEBPEQ15744 281 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 BMT2Q1RMZ1 405 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 ARSHQ5FYA8 562 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 FAM26FQ5R3K3 315 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 TMED8Q6PL24 325 aaPredicted RBP2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 MTHFD1LQ6UB35 978 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 C16orf86Q6ZW13 317 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 KCTD1Q719H9 257 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 FERMT3Q86UX7 667 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 CEP57Q86XR8 500 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 MCF2L2Q86YR7 1114 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 COLGALT2Q8IYK4 626 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 KIAA0319LQ8IZA0 1049 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 AHI1Q8N157 1196 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 C8orf58Q8NAV2 365 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 TP53I13Q8NBR0 393 aaPredicted RBP2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 LNX1Q8TBB1 728 aaPredicted RBP2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 CPA5Q8WXQ8 436 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 LPPQ93052 612 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 FEM1CQ96JP0 617 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 TMEM74Q96NL1 305 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 SPATA25Q9BR10 227 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 PLCD4Q9BRC7 762 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 RSRP1Q9BUV0 290 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 C19orf24Q9BVV8 132 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 TRAIPQ9BWF2 469 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 GPR174Q9BXC1 333 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 AMBRA1Q9C0C7 1298 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 SLAMF7Q9NQ25 335 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 SEL1LQ9UBV2 794 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 SERGEFQ9UGK8 458 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 TSC22D4Q9Y3Q8 395 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 PCDHA8Q9Y5H6 950 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 ENTPD2Q9Y5L3 495 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 CORINQ9Y5Q5 1042 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 DOCK9Q9BZ29 2069 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 LRP4O75096 1905 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 K7EM74 188 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 PLD2O14939 933 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 SCAMP1O15126 338 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 ADAM12O43184 909 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 BCAR3O75815 825 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 DNAJB5O75953 348 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 SORBS2O94875 1100 aaKnown RBP2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 ATE1O95260 518 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 F13A1P00488 732 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 POMCP01189 267 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 P4HBP07237 508 aaKnown RBP2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 GP1BAP07359 652 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 DBHP09172 617 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 NBPF7P0C2Y1 421 aaPredicted RBP2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 IMPDH2P12268 514 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 PDCP20941 246 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 KLRC1P26715 233 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 OXTRP30559 389 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 L1CAMP32004 1257 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 RABIFP47224 123 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZNF165P49910 485 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 RAB27AP51159 221 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 NCKAP1LP55160 1127 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 SP4Q02446 784 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 MVKQ03426 396 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 EIF3IQ13347 325 aaKnown RBP2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 DEFB109BQ30KR1 87 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 KRTAP24-1Q3LI83 254 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 GNPTABQ3T906 1256 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 VWA3BQ502W6 1294 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 MIDNQ504T8 468 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 ARHGAP15Q53QZ3 475 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 MIIPQ5JXC2 388 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 RTP2Q5QGT7 225 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 PRAMEF14Q5SWL7 426 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 C12orf60Q5U649 245 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 FAM171A1Q5VUB5 890 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 TSHZ3Q63HK5 1081 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 NAIF1Q69YI7 327 aaPredicted RBP2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 TRIM68Q6AZZ1 485 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 TWF2Q6IBS0 349 aaKnown RBP2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 RBM44Q6ZP01 1051 aaKnown RBP2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 NLRC3Q7RTR2 1065 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 TRMT11Q7Z4G4 463 aaKnown RBP2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 SKAP1Q86WV1 359 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 FBXO39Q8N4B4 442 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 NETO2Q8NC67 525 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 GIMAP8Q8ND71 665 aaPredicted RBP2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZNF461Q8TAF7 563 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms