RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 CHST9Q7L1S5 443 aa12.97□□□□□ -0.33
CAPN1-223ENST00000533079 ADIPOR2Q86V24 386 aa12.97□□□□□ -0.33
CAPN1-223ENST00000533079 SLC9A9Q8IVB4 645 aa12.97□□□□□ -0.33
CAPN1-223ENST00000533079 DCBLD1Q8N8Z6 715 aa12.97□□□□□ -0.33
CAPN1-223ENST00000533079 OR2T34Q8NGX1 318 aa12.97□□□□□ -0.33
CAPN1-223ENST00000533079 LGMNQ99538 433 aa12.97□□□□□ -0.33
CAPN1-223ENST00000533079 PANK2Q9BZ23 570 aa12.97□□□□□ -0.33
CAPN1-223ENST00000533079 CLMPQ9H6B4 373 aa12.97□□□□□ -0.33
CAPN1-223ENST00000533079 ABCB8Q9NUT2 735 aa12.97□□□□□ -0.33
CAPN1-223ENST00000533079 ADAMTS1Q9UHI8 967 aa12.97□□□□□ -0.33
CAPN1-223ENST00000533079 HBS1LQ9Y450 684 aaKnown RBP12.97□□□□□ -0.33
CAPN1-223ENST00000533079 SLC12A8A0AV02 714 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 C10orf142B7Z368 130 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 CBX4O00257 560 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 IKBKBO14920 756 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 CKMT2P17540 419 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 GLDCP23378 1020 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 ACP1P24666 158 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 RXRGP48443 463 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 CCR5P51681 352 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 GALCP54803 685 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 CLDN6P56747 220 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 SLC8A3P57103 927 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 YWHAGP61981 247 aaKnown RBP eCLIP12.96□□□□□ -0.33
CAPN1-223ENST00000533079 CCDC173Q0VFZ6 552 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 ARID5BQ14865 1188 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 MPP7Q5T2T1 576 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 EID2Q8N6I1 236 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 IQUBQ8NA54 791 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 KDM1BQ8NB78 822 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 TMC2Q8TDI7 906 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 CYB5D2Q8WUJ1 264 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 ZNF578Q96N58 590 aaPredicted RBP12.96□□□□□ -0.33
CAPN1-223ENST00000533079 TWNKQ96RR1 684 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 C7orf25Q9BPX7 421 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 UBXN6Q9BZV1 441 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 AASDHPPTQ9NRN7 309 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 FBXL12Q9NXK8 326 aa12.96□□□□□ -0.33
CAPN1-223ENST00000533079 A0A1W2PR77 199 aa12.95□□□□□ -0.34
CAPN1-223ENST00000533079 MAGEC1O60732 1142 aa12.95□□□□□ -0.34
CAPN1-223ENST00000533079 ASLP04424 464 aa12.95□□□□□ -0.34
CAPN1-223ENST00000533079 WNT1P04628 370 aa12.95□□□□□ -0.34
CAPN1-223ENST00000533079 POLR2EP19388 210 aaKnown RBP12.95□□□□□ -0.34
CAPN1-223ENST00000533079 NXPH1P58417 271 aa12.95□□□□□ -0.34
CAPN1-223ENST00000533079 ST8SIA6P61647 398 aa12.95□□□□□ -0.34
CAPN1-223ENST00000533079 E2F1Q01094 437 aa12.95□□□□□ -0.34
CAPN1-223ENST00000533079 CEBPZQ03701 1054 aaKnown RBP12.95□□□□□ -0.34
CAPN1-223ENST00000533079 KCNH2Q12809 1159 aa12.95□□□□□ -0.34
CAPN1-223ENST00000533079 RAB41Q5JT25 222 aa12.95□□□□□ -0.34
CAPN1-223ENST00000533079 ADGRF1Q5T601 910 aa12.95□□□□□ -0.34
CAPN1-223ENST00000533079 MBLAC2Q68D91 279 aa12.95□□□□□ -0.34
CAPN1-223ENST00000533079 NCEH1Q6PIU2 408 aa12.95□□□□□ -0.34
CAPN1-223ENST00000533079 SV2AQ7L0J3 742 aa12.95□□□□□ -0.34
CAPN1-223ENST00000533079 LSMEM2Q8N112 164 aa12.95□□□□□ -0.34
CAPN1-223ENST00000533079 TTC39CQ8N584 583 aa12.95□□□□□ -0.34
CAPN1-223ENST00000533079 ZNF366Q8N895 744 aa12.95□□□□□ -0.34
CAPN1-223ENST00000533079 ARID3AQ99856 593 aa12.95□□□□□ -0.34
CAPN1-223ENST00000533079 NIF3L1Q9GZT8 377 aa12.95□□□□□ -0.34
CAPN1-223ENST00000533079 NYNRINQ9P2P1 1898 aaKnown RBP12.94□□□□□ -0.34
CAPN1-223ENST00000533079 PVALEFA0A1B0GWK0 134 aa12.94□□□□□ -0.34
CAPN1-223ENST00000533079 FAM47DPA6NHR8 397 aa12.94□□□□□ -0.34
CAPN1-223ENST00000533079 B8ZZF3 427 aa12.94□□□□□ -0.34
CAPN1-223ENST00000533079 IRAK2O43187 625 aa12.94□□□□□ -0.34
CAPN1-223ENST00000533079 DXOO77932 396 aaKnown RBP12.94□□□□□ -0.34
CAPN1-223ENST00000533079 KIF20AO95235 890 aa12.94□□□□□ -0.34
CAPN1-223ENST00000533079 MBD3O95983 291 aa12.94□□□□□ -0.34
CAPN1-223ENST00000533079 NUDT1P36639 197 aa12.94□□□□□ -0.34
CAPN1-223ENST00000533079 NASPP49321 788 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-223ENST00000533079 INSM1Q01101 510 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-223ENST00000533079 OVGP1Q12889 678 aa12.94□□□□□ -0.34
CAPN1-223ENST00000533079 GSE1Q14687 1217 aa12.94□□□□□ -0.34
CAPN1-223ENST00000533079 CST6Q15828 149 aa12.94□□□□□ -0.34
CAPN1-223ENST00000533079 HNRNPA1L2Q32P51 320 aaKnown RBP12.94□□□□□ -0.34
CAPN1-223ENST00000533079 PPP1R26Q5T8A7 1209 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-223ENST00000533079 SPOPLQ6IQ16 392 aa12.94□□□□□ -0.34
CAPN1-223ENST00000533079 IQCHQ86VS3 1027 aa12.94□□□□□ -0.34
CAPN1-223ENST00000533079 GANCQ8TET4 914 aa12.94□□□□□ -0.34
CAPN1-223ENST00000533079 SNRNP27Q8WVK2 155 aaKnown RBP12.94□□□□□ -0.34
CAPN1-223ENST00000533079 ELMO3Q96BJ8 720 aa12.94□□□□□ -0.34
CAPN1-223ENST00000533079 TMA16Q96EY4 203 aaKnown RBP12.94□□□□□ -0.34
CAPN1-223ENST00000533079 FAXDC2Q96IV6 333 aa12.94□□□□□ -0.34
CAPN1-223ENST00000533079 HIC2Q96JB3 615 aa12.94□□□□□ -0.34
CAPN1-223ENST00000533079 DMAC2Q9NW81 257 aa12.94□□□□□ -0.34
CAPN1-223ENST00000533079 MGAQ8IWI9 3026 aa12.94□□□□□ -0.34
CAPN1-223ENST00000533079 PTPRQQ9UMZ3 2332 aa12.93□□□□□ -0.34
CAPN1-223ENST00000533079 TLR4O00206 839 aa12.93□□□□□ -0.34
CAPN1-223ENST00000533079 PPP6R2O75170 966 aa12.93□□□□□ -0.34
CAPN1-223ENST00000533079 HLA-DRAP01903 254 aa12.93□□□□□ -0.34
CAPN1-223ENST00000533079 C6P13671 934 aa12.93□□□□□ -0.34
CAPN1-223ENST00000533079 ERVPABLB-1P60509 514 aa12.93□□□□□ -0.34
CAPN1-223ENST00000533079 DLG4P78352 724 aa12.93□□□□□ -0.34
CAPN1-223ENST00000533079 PM20D1Q6GTS8 502 aa12.93□□□□□ -0.34
CAPN1-223ENST00000533079 NAPEPLDQ6IQ20 393 aa12.93□□□□□ -0.34
CAPN1-223ENST00000533079 SND1Q7KZF4 910 aaKnown RBP eCLIP12.93□□□□□ -0.34
CAPN1-223ENST00000533079 KANSL1Q7Z3B3 1105 aa12.93□□□□□ -0.34
CAPN1-223ENST00000533079 FMNL3Q8IVF7 1028 aa12.93□□□□□ -0.34
CAPN1-223ENST00000533079 DHX40Q8IX18 779 aaKnown RBP12.93□□□□□ -0.34
CAPN1-223ENST00000533079 ZC3H3Q8IXZ2 948 aaKnown RBP12.93□□□□□ -0.34
CAPN1-223ENST00000533079 CCDC150Q8NCX0 1101 aa12.93□□□□□ -0.34
CAPN1-223ENST00000533079 DHX58Q96C10 678 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms