RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 PYROXD2Q8N2H3 581 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 KCTD6Q8NC69 237 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 ING5Q8WYH8 240 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 AZIN2Q96A70 460 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 FAF2Q96CS3 445 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 ZSWIM3Q96MP5 696 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 ZNF670Q9BS34 389 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 RCOR3Q9P2K3 495 aaPredicted RBP13.79□□□□□ -0.2
PRDM2-213ENST00000503842 SLC12A6Q9UHW9 1150 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 SNX10Q9Y5X0 201 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 MRFAP1Q9Y605 127 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 HS3ST4Q9Y661 456 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 HELZP42694 1942 aaKnown RBP13.79□□□□□ -0.2
PRDM2-213ENST00000503842 DOCK8Q8NF50 2099 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 hCG_1818297A0A087WSY0 165 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 FAM72CH0Y354 149 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 PRAMEF12O95522 483 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 LATS1O95835 1130 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 TCF3P15923 654 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 CORO1AP31146 461 aaKnown RBP13.78□□□□□ -0.2
PRDM2-213ENST00000503842 AVPR1AP37288 418 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 MTHFRP42898 656 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 HARS2P49590 506 aaKnown RBP13.78□□□□□ -0.2
PRDM2-213ENST00000503842 ZNF135P52742 658 aaPredicted RBP13.78□□□□□ -0.2
PRDM2-213ENST00000503842 MLLT6P55198 1093 aaPredicted RBP13.78□□□□□ -0.2
PRDM2-213ENST00000503842 FAM72AQ5TYM5 149 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 MANEALQ5VSG8 457 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 FAM72DQ6L9T8 149 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 Q6ZNB5 142 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 FAM72BQ86X60 149 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 SLC13A5Q86YT5 568 aaPredicted RBP13.78□□□□□ -0.2
PRDM2-213ENST00000503842 MAP7D3Q8IWC1 876 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 ZNF683Q8IZ20 524 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 SMRP1Q8NCR6 262 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 ACTRT1Q8TDG2 376 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 USP13Q92995 863 aaPredicted RBP13.78□□□□□ -0.2
PRDM2-213ENST00000503842 MS4A14Q96JA4 679 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 C1orf74Q96LT6 269 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 RIPOR3Q96MK2 946 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 PRMT1Q99873 361 aaKnown RBP13.78□□□□□ -0.2
PRDM2-213ENST00000503842 HERPUD2Q9BSE4 406 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 OSBPL8Q9BZF1 889 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 SLITRK6Q9H5Y7 841 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 L2HGDHQ9H9P8 463 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 RNF14Q9UBS8 474 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 EFR3BQ9Y2G0 817 aa13.78□□□□□ -0.2
PRDM2-213ENST00000503842 NUP210Q8TEM1 1887 aaPredicted RBP13.78□□□□□ -0.2
PRDM2-213ENST00000503842 H3BRJ5 948 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 LEFTY2O00292 366 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 PDE2AO00408 941 aaPredicted RBP13.77□□□□□ -0.21
PRDM2-213ENST00000503842 ACSL4O60488 711 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 IRF1P10914 325 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 HOXC13P31276 330 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 HTR7P34969 479 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 GGCXP38435 758 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 CETN2P41208 172 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 HCAR3P49019 387 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 USP4Q13107 963 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 DPYSQ14117 519 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 CBX2Q14781 532 aaPredicted RBP13.77□□□□□ -0.21
PRDM2-213ENST00000503842 WHAMMP3Q1A5X7 153 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 ODF2Q5BJF6 829 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 FAM133BQ5BKY9 247 aaKnown RBP13.77□□□□□ -0.21
PRDM2-213ENST00000503842 TFDP3Q5H9I0 405 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 PPP6R3Q5H9R7 873 aaPredicted RBP13.77□□□□□ -0.21
PRDM2-213ENST00000503842 MS4A13Q5J8X5 152 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 ACBD5Q5T8D3 534 aaPredicted RBP13.77□□□□□ -0.21
PRDM2-213ENST00000503842 NADSYN1Q6IA69 706 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 EP400NLQ6ZTU2 488 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 GET4Q7L5D6 327 aaPredicted RBP13.77□□□□□ -0.21
PRDM2-213ENST00000503842 DENND4AQ7Z401 1863 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 C14orf80Q86SX3 495 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 DDX42Q86XP3 938 aaKnown RBP eCLIP13.77□□□□□ -0.21
PRDM2-213ENST00000503842 CCDC50Q8IVM0 306 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 DEFB123Q8N688 67 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 SH3RF2Q8TEC5 729 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 SUSD6Q92537 303 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 FGF13Q92913 245 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 CAPZA3Q96KX2 299 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 CSPG4P5Q96PW8 444 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 CALN1Q9BXU9 219 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 DCLK3Q9C098 648 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 SMG9Q9H0W8 520 aaKnown RBP13.77□□□□□ -0.21
PRDM2-213ENST00000503842 TDP1Q9NUW8 608 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 GDE1Q9NZC3 331 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 SMARCAL1Q9NZC9 954 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 CWC15Q9P013 229 aaKnown RBP13.77□□□□□ -0.21
PRDM2-213ENST00000503842 CFAP97Q9P2B7 532 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 OR12D3Q9UGF7 316 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 CD207Q9UJ71 328 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 STOML2Q9UJZ1 356 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 AGO1Q9UL18 857 aaKnown RBP13.77□□□□□ -0.21
PRDM2-213ENST00000503842 CDH7Q9ULB5 785 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 NEU3Q9UQ49 428 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 CCL26Q9Y258 94 aa13.77□□□□□ -0.21
PRDM2-213ENST00000503842 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.76□□□□□ -0.21
PRDM2-213ENST00000503842 PGRMC1O00264 195 aaKnown RBP13.76□□□□□ -0.21
PRDM2-213ENST00000503842 EEF2KO00418 725 aaKnown RBP13.76□□□□□ -0.21
PRDM2-213ENST00000503842 LRIG2O94898 1065 aa13.76□□□□□ -0.21
PRDM2-213ENST00000503842 FGGP02679 453 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms