RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 SLIT3O75094 1523 aa5.72□□□□□ -1.49
HMGB3P5-201ENST00000428894 TNS2Q63HR2 1409 aa5.72□□□□□ -1.49
HMGB3P5-201ENST00000428894 ADCY9O60503 1353 aa5.71□□□□□ -1.5
HMGB3P5-201ENST00000428894 CA12O43570 354 aa5.71□□□□□ -1.5
HMGB3P5-201ENST00000428894 RBL1P28749 1068 aa5.71□□□□□ -1.5
HMGB3P5-201ENST00000428894 COPAP53621 1224 aa5.71□□□□□ -1.5
HMGB3P5-201ENST00000428894 GPC5P78333 572 aa5.71□□□□□ -1.5
HMGB3P5-201ENST00000428894 TXNL4AP83876 142 aaKnown RBP5.71□□□□□ -1.5
HMGB3P5-201ENST00000428894 GALEQ14376 348 aa5.71□□□□□ -1.5
HMGB3P5-201ENST00000428894 CLCA4Q14CN2 919 aa5.71□□□□□ -1.5
HMGB3P5-201ENST00000428894 C10orf25Q5T742 122 aa5.71□□□□□ -1.5
HMGB3P5-201ENST00000428894 ANO7Q6IWH7 933 aa5.71□□□□□ -1.5
HMGB3P5-201ENST00000428894 RNF44Q7L0R7 432 aa5.71□□□□□ -1.5
HMGB3P5-201ENST00000428894 BHLHA9Q7RTU4 235 aa5.71□□□□□ -1.5
HMGB3P5-201ENST00000428894 FSTL5Q8N475 847 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P5-201ENST00000428894 APOL5Q9BWW9 433 aa5.71□□□□□ -1.5
HMGB3P5-201ENST00000428894 BTBD1Q9H0C5 482 aa5.71□□□□□ -1.5
HMGB3P5-201ENST00000428894 NUP62CLQ9H1M0 184 aa5.71□□□□□ -1.5
HMGB3P5-201ENST00000428894 SNX13Q9Y5W8 968 aa5.71□□□□□ -1.5
HMGB3P5-201ENST00000428894 CPSF1Q10570 1443 aaKnown RBP5.71□□□□□ -1.5
HMGB3P5-201ENST00000428894 CACNA1IQ9P0X4 2223 aa5.71□□□□□ -1.5
HMGB3P5-201ENST00000428894 TRPM1Q7Z4N2 1603 aa5.7□□□□□ -1.5
HMGB3P5-201ENST00000428894 NTN1O95631 604 aa5.7□□□□□ -1.5
HMGB3P5-201ENST00000428894 ANXA2P07355 339 aaKnown RBP5.7□□□□□ -1.5
HMGB3P5-201ENST00000428894 TMEM191BP0C7N4 346 aa5.7□□□□□ -1.5
HMGB3P5-201ENST00000428894 TMEM225BP0DP42 221 aa5.7□□□□□ -1.5
HMGB3P5-201ENST00000428894 PRF1P14222 555 aa5.7□□□□□ -1.5
HMGB3P5-201ENST00000428894 HTRA4P83105 476 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P5-201ENST00000428894 PFKFB3Q16875 520 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P5-201ENST00000428894 IRF2BP2Q7Z5L9 587 aa5.7□□□□□ -1.5
HMGB3P5-201ENST00000428894 P3H2Q8IVL5 708 aa5.7□□□□□ -1.5
HMGB3P5-201ENST00000428894 ANKRD13AQ8IZ07 590 aa5.7□□□□□ -1.5
HMGB3P5-201ENST00000428894 HIC2Q96JB3 615 aa5.7□□□□□ -1.5
HMGB3P5-201ENST00000428894 SELENOOQ9BVL4 669 aa5.7□□□□□ -1.5
HMGB3P5-201ENST00000428894 BRIP1Q9BX63 1249 aa5.7□□□□□ -1.5
HMGB3P5-201ENST00000428894 AS3MTQ9HBK9 375 aa5.7□□□□□ -1.5
HMGB3P5-201ENST00000428894 TMEM184CQ9NVA4 438 aa5.7□□□□□ -1.5
HMGB3P5-201ENST00000428894 TTC21AQ8NDW8 1320 aa5.7□□□□□ -1.5
HMGB3P5-201ENST00000428894 ABCC6O95255 1503 aa5.69□□□□□ -1.5
HMGB3P5-201ENST00000428894 COL15A1P39059 1388 aa5.69□□□□□ -1.5
HMGB3P5-201ENST00000428894 PRAMEF2O60811 474 aa5.69□□□□□ -1.5
HMGB3P5-201ENST00000428894 CYP19A1P11511 503 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P5-201ENST00000428894 POLGP54098 1239 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P5-201ENST00000428894 YPEL5P62699 121 aa5.69□□□□□ -1.5
HMGB3P5-201ENST00000428894 ID2Q02363 134 aa5.69□□□□□ -1.5
HMGB3P5-201ENST00000428894 CCDC15Q0P6D6 951 aa5.69□□□□□ -1.5
HMGB3P5-201ENST00000428894 FHL1Q13642 323 aa5.69□□□□□ -1.5
HMGB3P5-201ENST00000428894 TRIM71Q2Q1W2 868 aaKnown RBP5.69□□□□□ -1.5
HMGB3P5-201ENST00000428894 RRAGBQ5VZM2 374 aa5.69□□□□□ -1.5
HMGB3P5-201ENST00000428894 WDR75Q8IWA0 830 aaKnown RBP5.69□□□□□ -1.5
HMGB3P5-201ENST00000428894 PHKBQ93100 1093 aa5.69□□□□□ -1.5
HMGB3P5-201ENST00000428894 PRR11Q96HE9 360 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P5-201ENST00000428894 FAM227BQ96M60 508 aa5.69□□□□□ -1.5
HMGB3P5-201ENST00000428894 CINPQ9BW66 212 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P5-201ENST00000428894 UNKQ9C0B0 810 aaKnown RBP5.69□□□□□ -1.5
HMGB3P5-201ENST00000428894 TTC21BQ7Z4L5 1316 aa5.69□□□□□ -1.5
HMGB3P5-201ENST00000428894 ZMYM2Q9UBW7 1377 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 IKBKBO14920 756 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 KCNAB3O43448 404 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 TLR2O60603 784 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 WDR47O94967 919 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 TACR3P29371 465 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 HTR7P34969 479 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 CFHR1Q03591 330 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 FHL3Q13643 280 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 GRHL2Q6ISB3 625 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 DEF8Q6ZN54 512 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 MBD3L2Q8NHZ7 208 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 WACQ9BTA9 647 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 ADGRE3Q9BY15 652 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 SLC25A32Q9H2D1 315 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 VPS45Q9NRW7 570 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 CORO2BQ9UQ03 480 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 EVC2Q86UK5 1308 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 IGSF1Q8N6C5 1336 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 CENPJQ9HC77 1338 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 LY75O60449 1722 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 WDR90Q96KV7 1748 aa5.68□□□□□ -1.5
HMGB3P5-201ENST00000428894 ANKRD36BQ8N2N9 1353 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 USP47Q96K76 1375 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 TUBGCP6Q96RT7 1819 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 PIK3C2AO00443 1686 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 QRICH2Q9H0J4 1663 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 MYMKA6NI61 221 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 IL18RAPO95256 599 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 TMIGD3P0DMS9 266 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 CTSAP10619 480 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 GALNSP34059 522 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 THBS4P35443 961 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 RPS13P62277 151 aaKnown RBP5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 HSF1Q00613 529 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 MTAPQ13126 283 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 DNASE1L3Q13609 305 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 DAG1Q14118 895 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 KPNB1Q14974 876 aaKnown RBP5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 FAM110CQ1W6H9 321 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 TIFAQ96CG3 184 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 IQCDQ96DY2 449 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 NUAK2Q9H093 628 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 FOXP1Q9H334 677 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms