RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 SNRNP25Q9BV90 132 aaKnown RBP7.48□□□□□ -1.21
LSM8-204ENST00000424702 MFSD1Q9H3U5 465 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 CFAP97Q9P2B7 532 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 EFR3BQ9Y2G0 817 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 WDR27A2RRH5 827 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 AP3B1O00203 1094 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 LATS1O95835 1130 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 ATP5BP06576 529 aaKnown RBP7.47□□□□□ -1.21
LSM8-204ENST00000424702 TNFRSF8P28908 595 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 EPHB2P29323 1055 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 SDHAF4Q5VUM1 108 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 CASC4Q6P4E1 433 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 DSG4Q86SJ6 1040 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 MAB21L3Q8N8X9 362 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 CD101Q93033 1021 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 HLA-CQ95604 372 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 PSMG2Q969U7 264 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 SELENOSQ9BQE4 189 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 FOXP3Q9BZS1 431 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 GDE1Q9NZC3 331 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 WHRNQ9P202 907 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 TPX2Q9ULW0 747 aaKnown RBP7.47□□□□□ -1.21
LSM8-204ENST00000424702 PABPN1LA6NDY0 278 aaKnown RBP7.47□□□□□ -1.21
LSM8-204ENST00000424702 APOC4-APOC2K7ER74 178 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 IRAK2O43187 625 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 RNASEH1O60930 286 aaKnown RBP7.47□□□□□ -1.21
LSM8-204ENST00000424702 RNF40O75150 1001 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 APOC2P02655 101 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 POU2F2P09086 479 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 TGM2P21980 687 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 TUBP50607 506 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 ITGA8P53708 1063 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 OGDHQ02218 1023 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 AP1B1Q10567 949 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 TAF5Q15542 800 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 CAPN12Q6ZSI9 719 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 BBS12Q6ZW61 710 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 TRMT11Q7Z4G4 463 aaKnown RBP7.47□□□□□ -1.21
LSM8-204ENST00000424702 DQX1Q8TE96 717 aaKnown RBP7.47□□□□□ -1.21
LSM8-204ENST00000424702 GANCQ8TET4 914 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 TEKT4Q8WW24 435 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 CAVIN3Q969G5 261 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 SAYSD1Q9NPB0 183 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 IPO11Q9UI26 975 aaKnown RBP7.47□□□□□ -1.21
LSM8-204ENST00000424702 CYTH4Q9UIA0 394 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 TRIP12Q14669 1992 aaPredicted RBP7.47□□□□□ -1.21
LSM8-204ENST00000424702 ACSL3O95573 720 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 RHOP08100 348 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 GGCXP38435 758 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 RENBPP51606 427 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 GAD2Q05329 585 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 SULT2A1Q06520 285 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 BBS9Q3SYG4 887 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 ANKRD54Q6NXT1 300 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 OLFML1Q6UWY5 402 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 TAOK1Q7L7X3 1001 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 LGI2Q8N0V4 545 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 ADAM32Q8TC27 787 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 FBXO25Q8TCJ0 367 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 AENQ8WTP8 325 aaKnown RBP7.47□□□□□ -1.21
LSM8-204ENST00000424702 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.47□□□□□ -1.21
LSM8-204ENST00000424702 SMOQ99835 787 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 TMEM121Q9BTD3 319 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 DDX23Q9BUQ8 820 aaKnown RBP7.47□□□□□ -1.21
LSM8-204ENST00000424702 RETREG1Q9H6L5 497 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 PAK5Q9P286 719 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 KLHL8Q9P2G9 620 aaPredicted RBP7.47□□□□□ -1.21
LSM8-204ENST00000424702 RCOR3Q9P2K3 495 aaPredicted RBP7.47□□□□□ -1.21
LSM8-204ENST00000424702 DNPEPQ9ULA0 475 aa7.47□□□□□ -1.21
LSM8-204ENST00000424702 TCRBV7S2A1N4TA0A589 114 aa7.46□□□□□ -1.21
LSM8-204ENST00000424702 PER2O15055 1255 aa7.46□□□□□ -1.21
LSM8-204ENST00000424702 KCNA5P22460 613 aa7.46□□□□□ -1.21
LSM8-204ENST00000424702 AFF1P51825 1210 aaKnown RBP7.46□□□□□ -1.21
LSM8-204ENST00000424702 EPHB1P54762 984 aa7.46□□□□□ -1.21
LSM8-204ENST00000424702 UAP1Q16222 522 aaPredicted RBP7.46□□□□□ -1.21
LSM8-204ENST00000424702 IL31Q6EBC2 164 aa7.46□□□□□ -1.21
LSM8-204ENST00000424702 GRAMD4Q6IC98 578 aa7.46□□□□□ -1.21
LSM8-204ENST00000424702 FAM109BQ6ICB4 259 aaPredicted RBP7.46□□□□□ -1.21
LSM8-204ENST00000424702 DEFB123Q8N688 67 aa7.46□□□□□ -1.21
LSM8-204ENST00000424702 FAM71DQ8N9W8 422 aa7.46□□□□□ -1.21
LSM8-204ENST00000424702 C3orf58Q8NDZ4 430 aa7.46□□□□□ -1.21
LSM8-204ENST00000424702 GSTCDQ8NEC7 633 aa7.46□□□□□ -1.21
LSM8-204ENST00000424702 BPIFB1Q8TDL5 484 aa7.46□□□□□ -1.21
LSM8-204ENST00000424702 SPOCK2Q92563 424 aa7.46□□□□□ -1.21
LSM8-204ENST00000424702 IRF7Q92985 503 aa7.46□□□□□ -1.21
LSM8-204ENST00000424702 MRRFQ96E11 262 aaKnown RBP7.46□□□□□ -1.21
LSM8-204ENST00000424702 KCNK16Q96T55 309 aa7.46□□□□□ -1.21
LSM8-204ENST00000424702 CLSTN3Q9BQT9 956 aa7.46□□□□□ -1.21
LSM8-204ENST00000424702 TXNDC16Q9P2K2 825 aa7.46□□□□□ -1.21
LSM8-204ENST00000424702 TMEM59LQ9UK28 342 aa7.46□□□□□ -1.21
LSM8-204ENST00000424702 RAD54BQ9Y620 910 aa7.46□□□□□ -1.21
LSM8-204ENST00000424702 A6NNZ2 444 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 SMAPO00193 183 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 APODP05090 189 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 ITGB8P26012 769 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 CDKN2BP42772 138 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 DRG2P55039 364 aaKnown RBP7.46□□□□□ -1.22
LSM8-204ENST00000424702 LAMB3Q13751 1172 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 PTK6Q13882 451 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 POLD3Q15054 466 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms