RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 NOTUMQ6P988 496 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 ARHGAP24Q8N264 748 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 OMDQ99983 421 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 FERMT1Q9BQL6 677 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 SUDS3Q9H7L9 328 aaPredicted RBP13.76□□□□□ -0.21
COL6A2-204ENST00000409416 SAR1AQ9NR31 198 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 FAM8A1Q9UBU6 413 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 SFMBT1Q9UHJ3 866 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 TRIP11Q15643 1979 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 SPECC1L-ADORA2AF8WAN1 911 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 RNF103O00237 685 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 WFS1O76024 890 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 PSMG1O95456 288 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 GNAZP19086 355 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 MAXP61244 160 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 SOX4Q06945 474 aaPredicted RBP13.76□□□□□ -0.21
COL6A2-204ENST00000409416 STX3Q13277 289 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 ATG16L1Q676U5 607 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 LRRC74BQ6ZQY2 392 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 RGS9BPQ6ZS82 235 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 NIPA2Q8N8Q9 360 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 BRI3BPQ8WY22 251 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 EBF4Q9BQW3 602 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 MYBPHLA2RUH7 354 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 ADCY6O43306 1168 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 TBX10O75333 385 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 IL18RAPO95256 599 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 SKIP12755 728 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 GRIK1P39086 918 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 ZNF143P52747 638 aaPredicted RBP13.76□□□□□ -0.21
COL6A2-204ENST00000409416 ZNF460Q14592 562 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 TSHZ1Q6ZSZ6 1077 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 UBR7Q8N806 425 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 DOCK3Q8IZD9 2030 aa13.75□□□□□ -0.21
COL6A2-204ENST00000409416 SMIM28A0A1B0GU29 152 aa13.75□□□□□ -0.21
COL6A2-204ENST00000409416 MFSD11O43934 449 aa13.75□□□□□ -0.21
COL6A2-204ENST00000409416 DLDP09622 509 aaKnown RBP13.75□□□□□ -0.21
COL6A2-204ENST00000409416 ATP6V1C1P21283 382 aa13.75□□□□□ -0.21
COL6A2-204ENST00000409416 NOMO2Q5JPE7 1267 aa13.75□□□□□ -0.21
COL6A2-204ENST00000409416 LDB1Q86U70 411 aaPredicted RBP13.75□□□□□ -0.21
COL6A2-204ENST00000409416 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.75□□□□□ -0.21
COL6A2-204ENST00000409416 CMASQ8NFW8 434 aaPredicted RBP13.75□□□□□ -0.21
COL6A2-204ENST00000409416 OR6P1Q8NGX9 317 aa13.75□□□□□ -0.21
COL6A2-204ENST00000409416 FZD8Q9H461 694 aa13.75□□□□□ -0.21
COL6A2-204ENST00000409416 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.75□□□□□ -0.21
COL6A2-204ENST00000409416 TEX264Q9Y6I9 313 aa13.75□□□□□ -0.21
COL6A2-204ENST00000409416 PRR5-ARHGAP8B1AHC4 643 aa13.75□□□□□ -0.21
COL6A2-204ENST00000409416 TRDMT1O14717 391 aaKnown RBP13.75□□□□□ -0.21
COL6A2-204ENST00000409416 LMNAP02545 664 aaKnown RBP13.75□□□□□ -0.21
COL6A2-204ENST00000409416 ARHGAP8P85298 464 aa13.75□□□□□ -0.21
COL6A2-204ENST00000409416 SLC6A3Q01959 620 aa13.75□□□□□ -0.21
COL6A2-204ENST00000409416 USP4Q13107 963 aa13.75□□□□□ -0.21
COL6A2-204ENST00000409416 ITGA9Q13797 1035 aa13.75□□□□□ -0.21
COL6A2-204ENST00000409416 PRKD1Q15139 912 aaPredicted RBP13.75□□□□□ -0.21
COL6A2-204ENST00000409416 UNC5AQ6ZN44 842 aa13.75□□□□□ -0.21
COL6A2-204ENST00000409416 TREML1Q86YW5 311 aa13.75□□□□□ -0.21
COL6A2-204ENST00000409416 RBM15BQ8NDT2 890 aaKnown RBP13.75□□□□□ -0.21
COL6A2-204ENST00000409416 CYP2S1Q96SQ9 504 aa13.75□□□□□ -0.21
COL6A2-204ENST00000409416 TSC22D3Q99576 134 aa13.75□□□□□ -0.21
COL6A2-204ENST00000409416 C20orf96Q9NUD7 363 aaPredicted RBP13.75□□□□□ -0.21
COL6A2-204ENST00000409416 MPP6Q9NZW5 540 aa13.75□□□□□ -0.21
COL6A2-204ENST00000409416 SOCS7O14512 581 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 CNMDO75829 334 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 ELNP15502 786 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 TKTP29401 623 aaKnown RBP13.74□□□□□ -0.21
COL6A2-204ENST00000409416 CCR10P46092 362 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 TAF6P49848 677 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 PLIN5Q00G26 463 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 CTC1Q2NKJ3 1217 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 CERCAMQ5T4B2 595 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 RNF220Q5VTB9 566 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 RPS27LQ71UM5 84 aaKnown RBP13.74□□□□□ -0.21
COL6A2-204ENST00000409416 PLEKHH3Q7Z736 793 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 SCAMP5Q8TAC9 235 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 TSNARE1Q96NA8 513 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 SPON2Q9BUD6 331 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 WWP1Q9H0M0 922 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 NRDE2Q9H7Z3 1164 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 GBA2Q9HCG7 927 aaPredicted RBP13.74□□□□□ -0.21
COL6A2-204ENST00000409416 CYLDQ9NQC7 956 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 SCOCQ9UIL1 159 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 ZNF112Q9UJU3 913 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 FAM189A1O60320 539 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 SLC25A3Q00325 362 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 SPATA22Q8NHS9 363 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 MZB1Q8WU39 189 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 VCXQ9H320 206 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 MROH8Q9H579 483 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 KCNK13Q9HB14 408 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 IARS2Q9NSE4 1012 aaKnown RBP13.74□□□□□ -0.21
COL6A2-204ENST00000409416 DNAJC16Q9Y2G8 782 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 ATG7O95352 703 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 HSPA4LO95757 839 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 APOEP02649 317 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 CASP2P42575 452 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 SLC18A1P54219 525 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 SLC34A1Q06495 639 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 SLC10A2Q12908 348 aaPredicted RBP13.74□□□□□ -0.21
COL6A2-204ENST00000409416 SLC27A1Q6PCB7 646 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 PTAR1Q7Z6K3 402 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms