RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 TNFSF14O43557 240 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 FLNBO75369 2602 aaKnown RBP8.19□□□□□ -1.1
CLK1-215ENST00000621181 IGLV3-19P01714 112 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 KLKB1P03952 638 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 PRKCHP24723 683 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 GRK6P43250 576 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 KIF11P52732 1056 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 COPAP53621 1224 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 DLG4P78352 724 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 BNC1Q01954 994 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 EHHADHQ08426 723 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 LRMPQ12912 555 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 CKAP5Q14008 2032 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 STX1AQ16623 288 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 KIF19Q2TAC6 998 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 ZACNQ401N2 412 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 SPOPLQ6IQ16 392 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 MTERF4Q7Z6M4 381 aaKnown RBP8.19□□□□□ -1.1
CLK1-215ENST00000621181 MARCH9Q86YJ5 346 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 DENND1CQ8IV53 801 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 BAHD1Q8TBE0 780 aaPredicted RBP8.19□□□□□ -1.1
CLK1-215ENST00000621181 DDI1Q8WTU0 396 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 TAF4BQ92750 862 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 P2RY11Q96G91 374 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 BBC3Q96PG8 261 aaPredicted RBP8.19□□□□□ -1.1
CLK1-215ENST00000621181 HNRNPABQ99729 332 aaKnown RBP8.19□□□□□ -1.1
CLK1-215ENST00000621181 NT5C1AQ9BXI3 368 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 PCED1AQ9H1Q7 454 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 MAGEF1Q9HAY2 307 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 BTBD3Q9Y2F9 522 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 PCDHGA4Q9Y5G9 962 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 KALRNO60229 2985 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 HELZ2Q9BYK8 2649 aaKnown RBP8.19□□□□□ -1.1
CLK1-215ENST00000621181 POLR2DO15514 142 aaKnown RBP8.19□□□□□ -1.1
CLK1-215ENST00000621181 PPP6R2O75170 966 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 YEATS4O95619 227 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 ASS1P00966 412 aaKnown RBP8.19□□□□□ -1.1
CLK1-215ENST00000621181 ACSL1P33121 698 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 AFMP43652 599 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 ASPAP45381 313 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 EFEMP1Q12805 493 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 DBX2Q6ZNG2 339 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 SV2AQ7L0J3 742 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 ADAT2Q7Z6V5 191 aaKnown RBP8.19□□□□□ -1.1
CLK1-215ENST00000621181 C1orf216Q8TAB5 229 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 IGSF8Q969P0 613 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 PIWIL1Q96J94 861 aaKnown RBP8.19□□□□□ -1.1
CLK1-215ENST00000621181 DCLK3Q9C098 648 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 DNAI2Q9GZS0 605 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 C6orf106Q9H6K1 298 aaPredicted RBP8.19□□□□□ -1.1
CLK1-215ENST00000621181 FAM13BQ9NYF5 915 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 CLIC5Q9NZA1 410 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 AGO1Q9UL18 857 aaKnown RBP8.19□□□□□ -1.1
CLK1-215ENST00000621181 STRIP2Q9ULQ0 834 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 PLA2G4CQ9UP65 541 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 ANKRD6Q9Y2G4 727 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.19□□□□□ -1.1
CLK1-215ENST00000621181 SNX11Q9Y5W9 270 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 SETXQ7Z333 2677 aaKnown RBP8.18□□□□□ -1.1
CLK1-215ENST00000621181 A0A087WV48 116 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 FAM237AA0A1B0GTK4 181 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 PVALEFA0A1B0GWK0 134 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 TIMM44O43615 452 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 CUTAO60888 179 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 DKK1O94907 266 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 HLA-EP13747 358 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 CD58P19256 250 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 ABCG1P45844 678 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 GRIA4P48058 902 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 CCT8P50990 548 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 INCA1Q0VD86 236 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 PTPRNQ16849 979 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 INAVAQ3KP66 663 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 FNDC3BQ53EP0 1204 aaKnown RBP8.18□□□□□ -1.1
CLK1-215ENST00000621181 CEP135Q66GS9 1140 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 SHC4Q6S5L8 630 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 DHRS13Q6UX07 377 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 LAYNQ6UX15 382 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 SCD5Q86SK9 330 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 SCUBE3Q8IX30 993 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 OR2T3Q8NH03 318 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 TSC1Q92574 1164 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 TWNKQ96RR1 684 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 TRIM5Q9C035 493 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 BTBD1Q9H0C5 482 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 LHX5Q9H2C1 402 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 KCND1Q9NSA2 647 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 WDR70Q9NW82 654 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 MARCH2Q9P0N8 246 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 CLEC4EQ9ULY5 219 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 FRMD4BQ9Y2L6 1034 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 SLCO1B1Q9Y6L6 691 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 TMEM131Q92545 1883 aa8.18□□□□□ -1.1
CLK1-215ENST00000621181 SLC12A8A0AV02 714 aa8.17□□□□□ -1.1
CLK1-215ENST00000621181 KCNK3O14649 394 aa8.17□□□□□ -1.1
CLK1-215ENST00000621181 IKBKBO14920 756 aa8.17□□□□□ -1.1
CLK1-215ENST00000621181 PCDHGA12O60330 932 aa8.17□□□□□ -1.1
CLK1-215ENST00000621181 FSBPO95073 299 aa8.17□□□□□ -1.1
CLK1-215ENST00000621181 SEMA4FO95754 770 aa8.17□□□□□ -1.1
CLK1-215ENST00000621181 HLA-DRAP01903 254 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms