RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 ZC3H12AQ5D1E8 599 aaKnown RBP20.02■□□□□ 0.8
TCF3-219ENST00000610756 TMEM215Q68D42 235 aa20.02■□□□□ 0.8
TCF3-219ENST00000610756 AOPEPQ8N6M6 819 aa20.02■□□□□ 0.8
TCF3-219ENST00000610756 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.02■□□□□ 0.8
TCF3-219ENST00000610756 ZNF557Q8N988 423 aaPredicted RBP20.02■□□□□ 0.8
TCF3-219ENST00000610756 EPS8L1Q8TE68 723 aa20.02■□□□□ 0.8
TCF3-219ENST00000610756 HMGB4Q8WW32 186 aa20.02■□□□□ 0.8
TCF3-219ENST00000610756 C18orf8Q96DM3 657 aa20.02■□□□□ 0.8
TCF3-219ENST00000610756 BTN2A3PQ96KV6 586 aa20.02■□□□□ 0.8
TCF3-219ENST00000610756 ERGIC2Q96RQ1 377 aa20.02■□□□□ 0.8
TCF3-219ENST00000610756 CACNA2D2Q9NY47 1150 aa20.02■□□□□ 0.8
TCF3-219ENST00000610756 BCCIPQ9P287 314 aaKnown RBP eCLIP20.02■□□□□ 0.8
TCF3-219ENST00000610756 SLC12A6Q9UHW9 1150 aa20.02■□□□□ 0.8
TCF3-219ENST00000610756 PCDHGA5Q9Y5G8 931 aa20.02■□□□□ 0.8
TCF3-219ENST00000610756 STON1Q9Y6Q2 735 aa20.02■□□□□ 0.8
TCF3-219ENST00000610756 DMXL1Q9Y485 3027 aa20.02■□□□□ 0.8
TCF3-219ENST00000610756 SMTNL1A8MU46 457 aa20.02■□□□□ 0.79
TCF3-219ENST00000610756 KCNU1A8MYU2 1149 aa20.02■□□□□ 0.79
TCF3-219ENST00000610756 EPHB6O15197 1021 aa20.02■□□□□ 0.79
TCF3-219ENST00000610756 FOXD2O60548 495 aaPredicted RBP20.02■□□□□ 0.79
TCF3-219ENST00000610756 EPN2O95208 641 aa20.02■□□□□ 0.79
TCF3-219ENST00000610756 APOEP02649 317 aa20.02■□□□□ 0.79
TCF3-219ENST00000610756 GABRG2P18507 467 aa20.02■□□□□ 0.79
TCF3-219ENST00000610756 NOS2P35228 1153 aa20.02■□□□□ 0.79
TCF3-219ENST00000610756 SOX5P35711 763 aa20.02■□□□□ 0.79
TCF3-219ENST00000610756 SGSHP51688 502 aa20.02■□□□□ 0.79
TCF3-219ENST00000610756 PITX1P78337 314 aaPredicted RBP20.02■□□□□ 0.79
TCF3-219ENST00000610756 MS4A13Q5J8X5 152 aa20.02■□□□□ 0.79
TCF3-219ENST00000610756 TAF3Q5VWG9 929 aa20.02■□□□□ 0.79
TCF3-219ENST00000610756 ERICH1Q86X53 443 aa20.02■□□□□ 0.79
TCF3-219ENST00000610756 PGBD3Q8N328 593 aa20.02■□□□□ 0.79
TCF3-219ENST00000610756 SEMA4GQ9NTN9 838 aa20.02■□□□□ 0.79
TCF3-219ENST00000610756 INVSQ9Y283 1065 aa20.02■□□□□ 0.79
TCF3-219ENST00000610756 MYO18AQ92614 2054 aaKnown RBP20.01■□□□□ 0.79
TCF3-219ENST00000610756 SPTBN4Q9H254 2564 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 PRR5-ARHGAP8B1AHC4 643 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 TBL1XO60907 577 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 GRAP2O75791 330 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 GFPT2O94808 682 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 MMEP08473 750 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 SCNN1AP37088 669 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 ARHGAP8P85298 464 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 MAP7D1Q3KQU3 841 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 KIAA1211LQ6NV74 962 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 ATP6V0D2Q8N8Y2 350 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 HJURPQ8NCD3 748 aaPredicted RBP20.01■□□□□ 0.79
TCF3-219ENST00000610756 NEK11Q8NG66 645 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 FIBINQ8TAL6 211 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 WFIKKN2Q8TEU8 576 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 SPAG5Q96R06 1193 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 CIPCQ9C0C6 399 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 ARRDC1-AS1Q9H2J1 176 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 NLRC4Q9NPP4 1024 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 ABCB8Q9NUT2 735 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 DDIT4Q9NX09 232 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 RRN3Q9NYV6 651 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 NOCTQ9UK39 431 aaKnown RBP20.01■□□□□ 0.79
TCF3-219ENST00000610756 USP18Q9UMW8 372 aa20.01■□□□□ 0.79
TCF3-219ENST00000610756 TYW5A2RUC4 315 aaKnown RBP20■□□□□ 0.79
TCF3-219ENST00000610756 ATP1A3P13637 1013 aa20■□□□□ 0.79
TCF3-219ENST00000610756 CCR1P32246 355 aa20■□□□□ 0.79
TCF3-219ENST00000610756 STAT1P42224 750 aa20■□□□□ 0.79
TCF3-219ENST00000610756 MATKP42679 507 aa20■□□□□ 0.79
TCF3-219ENST00000610756 IL12RB1P42701 662 aa20■□□□□ 0.79
TCF3-219ENST00000610756 ID4P47928 161 aa20■□□□□ 0.79
TCF3-219ENST00000610756 CDR2Q01850 454 aa20■□□□□ 0.79
TCF3-219ENST00000610756 LMNB2Q03252 620 aa20■□□□□ 0.79
TCF3-219ENST00000610756 MTA1Q13330 715 aa20■□□□□ 0.79
TCF3-219ENST00000610756 ZNF234Q14588 700 aa20■□□□□ 0.79
TCF3-219ENST00000610756 KLHL40Q2TBA0 621 aa20■□□□□ 0.79
TCF3-219ENST00000610756 PMS2CLQ68D20 193 aa20■□□□□ 0.79
TCF3-219ENST00000610756 ADIPOR2Q86V24 386 aa20■□□□□ 0.79
TCF3-219ENST00000610756 DHX40Q8IX18 779 aaKnown RBP20■□□□□ 0.79
TCF3-219ENST00000610756 RLN3Q8WXF3 142 aa20■□□□□ 0.79
TCF3-219ENST00000610756 MYEOVQ96EZ4 313 aa20■□□□□ 0.79
TCF3-219ENST00000610756 LMLNQ96KR4 655 aa20■□□□□ 0.79
TCF3-219ENST00000610756 SPACA7Q96KW9 195 aa20■□□□□ 0.79
TCF3-219ENST00000610756 PCMTD1Q96MG8 357 aaPredicted RBP20■□□□□ 0.79
TCF3-219ENST00000610756 NUCKS1Q9H1E3 243 aaKnown RBP20■□□□□ 0.79
TCF3-219ENST00000610756 FAM204AQ9H8W3 233 aa20■□□□□ 0.79
TCF3-219ENST00000610756 TMEM51Q9NW97 253 aa20■□□□□ 0.79
TCF3-219ENST00000610756 XPO7Q9UIA9 1087 aaKnown RBP20■□□□□ 0.79
TCF3-219ENST00000610756 GGA2Q9UJY4 613 aa20■□□□□ 0.79
TCF3-219ENST00000610756 PLA2G4CQ9UP65 541 aa20■□□□□ 0.79
TCF3-219ENST00000610756 DCHS1Q96JQ0 3298 aa19.99■□□□□ 0.79
TCF3-219ENST00000610756 ZNF217O75362 1048 aa19.99■□□□□ 0.79
TCF3-219ENST00000610756 DAB1O75553 588 aa19.99■□□□□ 0.79
TCF3-219ENST00000610756 MOCS2O96007 188 aaPredicted RBP19.99■□□□□ 0.79
TCF3-219ENST00000610756 ZNF806P0C7X5 589 aa19.99■□□□□ 0.79
TCF3-219ENST00000610756 PABPC1P11940 636 aaKnown RBP19.99■□□□□ 0.79
TCF3-219ENST00000610756 ABCB4P21439 1286 aa19.99■□□□□ 0.79
TCF3-219ENST00000610756 SDHBP21912 280 aa19.99■□□□□ 0.79
TCF3-219ENST00000610756 ZNF165P49910 485 aa19.99■□□□□ 0.79
TCF3-219ENST00000610756 RPS24P62847 133 aaKnown RBP19.99■□□□□ 0.79
TCF3-219ENST00000610756 SPDYCQ5MJ68 293 aa19.99■□□□□ 0.79
TCF3-219ENST00000610756 PLA2G2CQ5R387 149 aa19.99■□□□□ 0.79
TCF3-219ENST00000610756 CHST9Q7L1S5 443 aa19.99■□□□□ 0.79
TCF3-219ENST00000610756 XYLT1Q86Y38 959 aa19.99■□□□□ 0.79
TCF3-219ENST00000610756 AHI1Q8N157 1196 aa19.99■□□□□ 0.79
TCF3-219ENST00000610756 MSANTD4Q8NCY6 345 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms