RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 DEPDC1BQ8WUY9 529 aa16.47■□□□□ 0.23
CSNK1D-212ENST00000580061 UBE2Q2Q8WVN8 375 aa16.47■□□□□ 0.23
CSNK1D-212ENST00000580061 TEKT4Q8WW24 435 aa16.47■□□□□ 0.23
CSNK1D-212ENST00000580061 ATXN2LQ8WWM7 1075 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-212ENST00000580061 C1orf74Q96LT6 269 aa16.47■□□□□ 0.23
CSNK1D-212ENST00000580061 RPP25Q9BUL9 199 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-212ENST00000580061 MAGEB5Q9BZ81 275 aa16.47■□□□□ 0.23
CSNK1D-212ENST00000580061 OSBPL2Q9H1P3 480 aa16.47■□□□□ 0.23
CSNK1D-212ENST00000580061 TBC1D14Q9P2M4 693 aa16.47■□□□□ 0.23
CSNK1D-212ENST00000580061 AP4E1Q9UPM8 1137 aa16.47■□□□□ 0.23
CSNK1D-212ENST00000580061 HS3ST4Q9Y661 456 aa16.47■□□□□ 0.23
CSNK1D-212ENST00000580061 MYO10Q9HD67 2058 aa16.47■□□□□ 0.23
CSNK1D-212ENST00000580061 TCF20Q9UGU0 1960 aaKnown RBP16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 MYOFQ9NZM1 2061 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 GOLGA6L7A0A1B0GV03 622 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 LOC730098B7Z3J9 87 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 TNNT1P13805 278 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 PSMC3P17980 439 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 CTNNA2P26232 953 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 CTNNA1P35221 906 aaKnown RBP16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 GJC1P36383 396 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 CA9Q16790 459 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 ATP13A4Q4VNC1 1196 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 ADGRF1Q5T601 910 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 ACBD5Q5T8D3 534 aaPredicted RBP16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 RAP1GAP2Q684P5 730 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 ZSCAN30Q86W11 494 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 SLC35F6Q8N357 371 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 OSCP1Q8WVF1 389 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 HSPH1Q92598 858 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 NXPE3Q969Y0 559 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 PRMT1Q99873 361 aaKnown RBP16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 SIK2Q9H0K1 926 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 DHX35Q9H5Z1 703 aaKnown RBP16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 GPATCH2LQ9NWQ4 482 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 PRKAG3Q9UGI9 489 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 PCDHA3Q9Y5H8 950 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 SNX10Q9Y5X0 201 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 WNT6Q9Y6F9 365 aa16.46■□□□□ 0.23
CSNK1D-212ENST00000580061 CCDC66A2RUB6 948 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 SLC9A3R1O14745 358 aaPredicted RBP16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 SLC6A4P31645 630 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 CHKAP35790 457 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 GGCXP38435 758 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 MARCKSL1P49006 195 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 NRG1Q02297 640 aaPredicted RBP16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 DPYSL2Q16555 572 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 MEI1Q5TIA1 1274 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 CHSY1Q86X52 802 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 ADHFE1Q8IWW8 467 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 PYROXD2Q8N2H3 581 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 CPXM2Q8N436 756 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 RSAD2Q8WXG1 361 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 KRT35Q92764 455 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 OTUB2Q96DC9 234 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 ASIC4Q96FT7 647 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 HES6Q96HZ4 224 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 DDX50Q9BQ39 737 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 LINC00597Q9H2U6 94 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 KCNK12Q9HB15 430 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 THG1LQ9NWX6 298 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 DUS2Q9NX74 493 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 IGSF9Q9P2J2 1179 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 OR12D3Q9UGF7 316 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 LIMD1Q9UGP4 676 aa16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 PACSIN2Q9UNF0 486 aaPredicted RBP16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.45■□□□□ 0.22
CSNK1D-212ENST00000580061 MIF4GDA9UHW6 222 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 FAM72CH0Y354 149 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 GFRA2O00451 464 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 TACR2P21452 398 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 MSNP26038 577 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 L1CAMP32004 1257 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 IFNAR2P48551 515 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 PEX5P50542 639 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 ARSEP51690 589 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 ZP2Q05996 745 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 SEMA3BQ13214 749 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 AUHQ13825 339 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 GRM2Q14416 872 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 EML3Q32P44 896 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 ARTNQ5T4W7 220 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 FAM72AQ5TYM5 149 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 FAM72DQ6L9T8 149 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 C14orf80Q86SX3 495 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 FAM72BQ86X60 149 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 YAF2Q8IY57 180 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 ZNF683Q8IZ20 524 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 ADGRG2Q8IZP9 1017 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 FAM71BQ8TC56 605 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 ZFYVE19Q96K21 471 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 KCTD15Q96SI1 283 aaPredicted RBP16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 FAM83CQ9BQN1 747 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 TRMT61BQ9BVS5 477 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 KLHL11Q9NVR0 708 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 DDX56Q9NY93 547 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 VANGL2Q9ULK5 521 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 JRKLQ9Y4A0 524 aa16.44■□□□□ 0.22
CSNK1D-212ENST00000580061 TICRRQ7Z2Z1 1910 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms