RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 MTMR10Q9NXD2 777 aa13.82□□□□□ -0.2
PRDM2-213ENST00000503842 CLDND1Q9NY35 253 aa13.82□□□□□ -0.2
PRDM2-213ENST00000503842 AP4E1Q9UPM8 1137 aa13.82□□□□□ -0.2
PRDM2-213ENST00000503842 MRPS23Q9Y3D9 190 aaKnown RBP13.82□□□□□ -0.2
PRDM2-213ENST00000503842 CLUHO75153 1309 aa13.82□□□□□ -0.2
PRDM2-213ENST00000503842 C3orf70A6NLC5 250 aaPredicted RBP13.81□□□□□ -0.2
PRDM2-213ENST00000503842 SRGAP2O75044 1071 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 ZRANB2O95218 330 aaKnown RBP eCLIP13.81□□□□□ -0.2
PRDM2-213ENST00000503842 APOEP02649 317 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 PYGMP11217 842 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 CXCR5P32302 372 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 ITIH3Q06033 890 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 SEMA3BQ13214 749 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 ZNF211Q13398 564 aaPredicted RBP13.81□□□□□ -0.2
PRDM2-213ENST00000503842 ARL13BQ3SXY8 428 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 EFHC2Q5JST6 749 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 HABP4Q5JVS0 413 aaKnown RBP13.81□□□□□ -0.2
PRDM2-213ENST00000503842 NUGGCQ68CJ6 796 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 Q7L0L9 218 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 ANKS1BQ7Z6G8 1248 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 RCOR2Q8IZ40 523 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 ITFG1Q8TB96 612 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 ADAMTS19Q8TE59 1207 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 HSPH1Q92598 858 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 RNF34Q969K3 372 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 RBM41Q96IZ5 413 aaKnown RBP13.81□□□□□ -0.2
PRDM2-213ENST00000503842 HAPLN3Q96S86 360 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 KCTD15Q96SI1 283 aaPredicted RBP13.81□□□□□ -0.2
PRDM2-213ENST00000503842 CDX2Q99626 313 aaPredicted RBP13.81□□□□□ -0.2
PRDM2-213ENST00000503842 MAGEB5Q9BZ81 275 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 OSBPL2Q9H1P3 480 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 PCDH18Q9HCL0 1135 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 CDH22Q9UJ99 828 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 ARHGAP26Q9UNA1 814 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 CPQQ9Y646 472 aa13.81□□□□□ -0.2
PRDM2-213ENST00000503842 CDH23Q9H251 3354 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 LRRD1A4D1F6 860 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 PI4K2BG5E9Z4 385 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 ZNF185O15231 689 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 PAGE1O75459 146 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 STC2O76061 302 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 URI1O94763 535 aaPredicted RBP13.8□□□□□ -0.2
PRDM2-213ENST00000503842 CKMP06732 381 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 HMBSP08397 361 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 CD48P09326 243 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 FSHRP23945 695 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 KDELR1P24390 212 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 WEE1P30291 646 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 L1CAMP32004 1257 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 PTPN7P35236 360 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 KCNQ1P51787 676 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 CDH6P55285 790 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 COPS2P61201 443 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 ZXDBP98169 803 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 TUBB2AQ13885 445 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 PDK2Q15119 407 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 PPP2R5EQ16537 467 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 DNTTIP2Q5QJE6 756 aaKnown RBP13.8□□□□□ -0.2
PRDM2-213ENST00000503842 AADACL2Q6P093 401 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 MFSD7Q6UXD7 560 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 SPOCD1Q6ZMY3 1216 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 VSIG1Q86XK7 387 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 CMTM8Q8IZV2 173 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 MICALL1Q8N3F8 863 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 RASGEF1CQ8N431 466 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 ATP6V0D2Q8N8Y2 350 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 MYLIPQ8WY64 445 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 TSC1Q92574 1164 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 WBP2Q969T9 261 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 BTN2A3PQ96KV6 586 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 GUCD1Q96NT3 240 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 TUBB2BQ9BVA1 445 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 KDM4CQ9H3R0 1056 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 DHX35Q9H5Z1 703 aaKnown RBP13.8□□□□□ -0.2
PRDM2-213ENST00000503842 GKN1Q9NS71 199 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 SMPD4Q9NXE4 827 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 XPO7Q9UIA9 1087 aaKnown RBP13.8□□□□□ -0.2
PRDM2-213ENST00000503842 CDC23Q9UJX2 597 aa13.8□□□□□ -0.2
PRDM2-213ENST00000503842 TTC7AQ9ULT0 858 aaPredicted RBP13.8□□□□□ -0.2
PRDM2-213ENST00000503842 ZNF487B1APH4 448 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 CEP104O60308 925 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 GREM1O60565 184 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 MOCS2O96007 188 aaPredicted RBP13.79□□□□□ -0.2
PRDM2-213ENST00000503842 KLKB1P03952 638 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 CD46P15529 392 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 IL4RP24394 825 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 CDKN2BP42772 138 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 NRG1Q02297 640 aaPredicted RBP13.79□□□□□ -0.2
PRDM2-213ENST00000503842 MTA1Q13330 715 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 DPYSL3Q14195 570 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 KRT81Q14533 505 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 ATAT1Q5SQI0 421 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 ZFYVE27Q5T4F4 411 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 ARTNQ5T4W7 220 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 SEL1L2Q5TEA6 688 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 PIK3R6Q5UE93 754 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 CES5AQ6NT32 575 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 CREG2Q8IUH2 290 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 UNC45BQ8IWX7 931 aa13.79□□□□□ -0.2
PRDM2-213ENST00000503842 NPAS3Q8IXF0 933 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms