RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ADIPOR2Q86V24 386 aa16.33■□□□□ 0.2
HDAC6-236ENST00000498808 CDK5RAP1Q96SZ6 601 aaKnown RBP16.33■□□□□ 0.2
HDAC6-236ENST00000498808 KBTBD4Q9NVX7 518 aa16.33■□□□□ 0.2
HDAC6-236ENST00000498808 PLA2G4CQ9UP65 541 aa16.33■□□□□ 0.2
HDAC6-236ENST00000498808 FAM47DPA6NHR8 397 aa16.32■□□□□ 0.2
HDAC6-236ENST00000498808 WNT9AO14904 365 aa16.32■□□□□ 0.2
HDAC6-236ENST00000498808 EXOC3O60645 756 aa16.32■□□□□ 0.2
HDAC6-236ENST00000498808 P4HA1P13674 534 aa16.32■□□□□ 0.2
HDAC6-236ENST00000498808 AP3M2P53677 418 aa16.32■□□□□ 0.2
HDAC6-236ENST00000498808 GALCP54803 685 aa16.32■□□□□ 0.2
HDAC6-236ENST00000498808 ASIC1P78348 528 aa16.32■□□□□ 0.2
HDAC6-236ENST00000498808 EHHADHQ08426 723 aa16.32■□□□□ 0.2
HDAC6-236ENST00000498808 PDE4CQ08493 712 aa16.32■□□□□ 0.2
HDAC6-236ENST00000498808 E2F4Q16254 413 aa16.32■□□□□ 0.2
HDAC6-236ENST00000498808 ZNF776Q68DI1 518 aaPredicted RBP16.32■□□□□ 0.2
HDAC6-236ENST00000498808 KIAA0907Q7Z7F0 614 aaPredicted RBP16.32■□□□□ 0.2
HDAC6-236ENST00000498808 FMNL3Q8IVF7 1028 aa16.32■□□□□ 0.2
HDAC6-236ENST00000498808 WFIKKN2Q8TEU8 576 aa16.32■□□□□ 0.2
HDAC6-236ENST00000498808 RFFLQ8WZ73 363 aa16.32■□□□□ 0.2
HDAC6-236ENST00000498808 ARID3AQ99856 593 aa16.32■□□□□ 0.2
HDAC6-236ENST00000498808 MTG2Q9H4K7 406 aa16.32■□□□□ 0.2
HDAC6-236ENST00000498808 CLMPQ9H6B4 373 aa16.32■□□□□ 0.2
HDAC6-236ENST00000498808 ABCB8Q9NUT2 735 aa16.32■□□□□ 0.2
HDAC6-236ENST00000498808 MARCH2Q9P0N8 246 aa16.32■□□□□ 0.2
HDAC6-236ENST00000498808 SERGEFQ9UGK8 458 aa16.32■□□□□ 0.2
HDAC6-236ENST00000498808 A0A1W2PR77 199 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 SLC12A8A0AV02 714 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 VPS37CA5D8V6 355 aaPredicted RBP16.31■□□□□ 0.2
HDAC6-236ENST00000498808 C10orf142B7Z368 130 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 STX6O43752 255 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 ASS1P00966 412 aaKnown RBP16.31■□□□□ 0.2
HDAC6-236ENST00000498808 GLDCP23378 1020 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 DLG4P78352 724 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 INCA1Q0VD86 236 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 BNIP3Q12983 259 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 KCNJ12Q14500 433 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 SGSM1Q2NKQ1 1148 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 ZACNQ401N2 412 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 MPPE1Q53F39 396 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 SFMBT2Q5VUG0 894 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 NCEH1Q6PIU2 408 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 USP30Q70CQ3 517 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 CACTIN-AS1Q8N1I8 211 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.31■□□□□ 0.2
HDAC6-236ENST00000498808 DCBLD1Q8N8Z6 715 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 GOLGA1Q92805 767 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 WBP1Q96G27 269 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 LGMNQ99538 433 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 PABPC3Q9H361 631 aaKnown RBP16.31■□□□□ 0.2
HDAC6-236ENST00000498808 GDF3Q9NR23 364 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 CLCA2Q9UQC9 943 aa16.31■□□□□ 0.2
HDAC6-236ENST00000498808 YKT6O15498 198 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 KIF20AO95235 890 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 DLDP09622 509 aaKnown RBP16.3■□□□□ 0.2
HDAC6-236ENST00000498808 PABPC1P11940 636 aaKnown RBP16.3■□□□□ 0.2
HDAC6-236ENST00000498808 CD38P28907 300 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 INSM1Q01101 510 aaPredicted RBP16.3■□□□□ 0.2
HDAC6-236ENST00000498808 RHDQ02161 417 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 ILKQ13418 452 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 MBLAC2Q68D91 279 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 CNNM4Q6P4Q7 775 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 KANSL1Q7Z3B3 1105 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 FAM181AQ8N9Y4 354 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 WFDC5Q8TCV5 224 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 SKA1Q96BD8 255 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 PLD4Q96BZ4 506 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 NAF1Q96HR8 494 aaKnown RBP16.3■□□□□ 0.2
HDAC6-236ENST00000498808 NT5C1AQ9BXI3 368 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 DUSP16Q9BY84 665 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 LRRC27Q9C0I9 530 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 RSPH9Q9H1X1 276 aaPredicted RBP16.3■□□□□ 0.2
HDAC6-236ENST00000498808 CPNE5Q9HCH3 593 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 AASDHPPTQ9NRN7 309 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 FBXL12Q9NXK8 326 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 CGNQ9P2M7 1197 aaKnown RBP16.3■□□□□ 0.2
HDAC6-236ENST00000498808 TFIP11Q9UBB9 837 aaKnown RBP16.3■□□□□ 0.2
HDAC6-236ENST00000498808 GGA2Q9UJY4 613 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 STRIP2Q9ULQ0 834 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 NCKAP1Q9Y2A7 1128 aa16.3■□□□□ 0.2
HDAC6-236ENST00000498808 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.3■□□□□ 0.2
HDAC6-236ENST00000498808 MORC2Q9Y6X9 1032 aaPredicted RBP16.3■□□□□ 0.2
HDAC6-236ENST00000498808 B8ZZF3 427 aa16.29■□□□□ 0.2
HDAC6-236ENST00000498808 ARHGAP6O43182 974 aa16.29■□□□□ 0.2
HDAC6-236ENST00000498808 RPN1P04843 607 aaKnown RBP16.29■□□□□ 0.2
HDAC6-236ENST00000498808 CKMT2P17540 419 aa16.29■□□□□ 0.2
HDAC6-236ENST00000498808 LY6DQ14210 128 aa16.29■□□□□ 0.2
HDAC6-236ENST00000498808 TRIP4Q15650 581 aaPredicted RBP16.29■□□□□ 0.2
HDAC6-236ENST00000498808 PKDCCQ504Y2 493 aa16.29■□□□□ 0.2
HDAC6-236ENST00000498808 PPP1R26Q5T8A7 1209 aaPredicted RBP16.29■□□□□ 0.2
HDAC6-236ENST00000498808 RSRC2Q7L4I2 434 aaKnown RBP16.29■□□□□ 0.2
HDAC6-236ENST00000498808 AHI1Q8N157 1196 aa16.29■□□□□ 0.2
HDAC6-236ENST00000498808 ZNF248Q8NDW4 579 aa16.29■□□□□ 0.2
HDAC6-236ENST00000498808 GANCQ8TET4 914 aa16.29■□□□□ 0.2
HDAC6-236ENST00000498808 TAF4BQ92750 862 aa16.29■□□□□ 0.2
HDAC6-236ENST00000498808 MYO19Q96H55 970 aa16.29■□□□□ 0.2
HDAC6-236ENST00000498808 USP28Q96RU2 1077 aa16.29■□□□□ 0.2
HDAC6-236ENST00000498808 SUN2Q9UH99 717 aa16.29■□□□□ 0.2
HDAC6-236ENST00000498808 A0A1W2PP55 124 aa16.28■□□□□ 0.2
HDAC6-236ENST00000498808 TRIM21P19474 475 aaKnown RBP16.28■□□□□ 0.2
HDAC6-236ENST00000498808 ARRB1P49407 418 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms