RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 TLK1Q9UKI8 766 aa2.18□□□□□ -2.06
NUCKS1-202ENST00000464938 GTF2A1LQ9UNN4 478 aa2.18□□□□□ -2.06
NUCKS1-202ENST00000464938 LRRFIP2Q9Y608 721 aaKnown RBP2.18□□□□□ -2.06
NUCKS1-202ENST00000464938 HMX3A6NHT5 357 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 LRRC3CA6NJW4 275 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 SAC3D1A6NKF1 404 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 TISP43B9A030 160 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 CLIC1O00299 241 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 EIF3FO00303 357 aaPredicted RBP2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 FYB1O15117 783 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 NCAM2O15394 837 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 SGPL1O95470 568 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 LATS1O95835 1130 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 IGLV2-14P01704 120 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 RFPL3SP0C7P2 107 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 CHN1P15882 459 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 AKT1P31749 480 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 HOXD12P35452 270 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 AARSP49588 968 aaKnown RBP eCLIP2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 AGTR2P50052 363 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 KRTAP10-11P60412 298 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 TLE2Q04725 743 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 SEMA3AQ14563 771 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 ERCC6LQ2NKX8 1250 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 PROSER3Q2NL68 480 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 ADCK5Q3MIX3 580 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 ZNF569Q5MCW4 686 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 TSTD2Q5T7W7 516 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 MAP3K21Q5TCX8 1036 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 NAPRTQ6XQN6 538 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 RRAGAQ7L523 313 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 SLC29A4Q7RTT9 530 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 LRRTM4Q86VH4 590 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 PRIMA1Q86XR5 153 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 RFX6Q8HWS3 928 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 TMTC1Q8IUR5 882 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 PTGR2Q8N8N7 351 aaPredicted RBP2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 MAFAQ8NHW3 353 aaPredicted RBP2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 HMGB4Q8WW32 186 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 IGFBPL1Q8WX77 278 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 USP13Q92995 863 aaPredicted RBP2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 ATP2A3Q93084 1043 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 DAZAP1Q96EP5 407 aaKnown RBP2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 REXO5Q96IC2 774 aaKnown RBP2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 HIC2Q96JB3 615 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 RITA1Q96K30 269 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 ZSCAN31Q96LW9 406 aaPredicted RBP2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 FYTTD1Q96QD9 318 aaKnown RBP2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 TWNKQ96RR1 684 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 MMS19Q96T76 1030 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 PYM1Q9BRP8 204 aaKnown RBP2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 ARHGAP39Q9C0H5 1083 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 CCDC134Q9H6E4 229 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 ELAC1Q9H777 363 aaKnown RBP2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 RIC8AQ9NPQ8 531 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 GGA3Q9NZ52 723 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 C9orf78Q9NZ63 289 aaPredicted RBP2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 KCND3Q9UK17 655 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 CCNL1Q9UK58 526 aaPredicted RBP2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 SLC12A4Q9UP95 1085 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 RCE1Q9Y256 329 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 B3GNT3Q9Y2A9 372 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 DERAQ9Y315 318 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 INSL6Q9Y581 213 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 PCDHB2Q9Y5E7 798 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 SIRT4Q9Y6E7 314 aaPredicted RBP2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 LMTK3Q96Q04 1460 aa2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 COL11A2P13942 1736 aaPredicted RBP2.17□□□□□ -2.06
NUCKS1-202ENST00000464938 WIPF3A6NGB9 483 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 C3orf70A6NLC5 250 aaPredicted RBP2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 KRTAP29-1A8MX34 341 aaPredicted RBP2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 POC1B-GALNT4F8VUJ3 575 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 EYA2O00167 538 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 HOXC11O43248 304 aaPredicted RBP2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 HNRNPRO43390 633 aaKnown RBP2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 EXOC3O60645 756 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 PYGLP06737 847 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 CHRM5P08912 532 aaPredicted RBP2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 GPD1P21695 349 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 PAX3P23760 479 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 YY1P25490 414 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 NDUFS1P28331 727 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 IDUAP35475 653 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 STAT6P42226 847 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 PTH2RP49190 550 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 PAPOLAP51003 745 aaKnown RBP2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 PROK1P58294 105 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 TAS2R50P59544 299 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 WDR5P61964 334 aaKnown RBP2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 VAMP2P63027 116 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 POU5F1BQ06416 359 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 CHRNDQ07001 517 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 DMWDQ09019 674 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 CBFBQ13951 182 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 MFSD13AQ14CX5 517 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 SEC23BQ15437 767 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 P3H1Q32P28 736 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 FAM153CQ494X1 144 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 ALFQ53S48 1182 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms