RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	PRRT4	C9JH25	899 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	MSI1	O43347	362 aa	Known RBP	13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	GRAP2	O75791	330 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	TPM3	P06753	285 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	HOXB2	P14652	356 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	NTSR1	P30989	418 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	CORO1A	P31146	461 aa	Known RBP	13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	COG7	P83436	770 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	BYSL	Q13895	437 aa	Known RBP	13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	MEA1	Q16626	185 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	NAA35	Q5VZE5	725 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	EGFLAM	Q63HQ2	1017 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	TPGS1	Q6ZTW0	290 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	CYP2U1	Q7Z449	544 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	SCML4	Q8N228	414 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	HMGB4	Q8WW32	186 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	IRGQ	Q8WZA9	623 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	BHMT	Q93088	406 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	CPXM1	Q96SM3	734 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	EDEM2	Q9BV94	578 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	DCLK3	Q9C098	648 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	ZDHHC4	Q9NPG8	344 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	COX16	Q9P0S2	106 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	IFNK	Q9P0W0	207 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	TJP2	Q9UDY2	1190 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	MBD1	Q9UIS9	605 aa	Predicted RBP	13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	INVS	Q9Y283	1065 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	SLC27A6	Q9Y2P4	619 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	CACNA1E	Q15878	2313 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	GON4L	Q3T8J9	2241 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	ASCC3	Q8N3C0	2202 aa	Known RBP	13.23	□□□□□ -0.29
FDPS-204	ENST00000461507		A0A1B0GTH6	734 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	GOLGA8S	H3BPF8	625 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	GFRA2	O00451	464 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	GABBR2	O75899	941 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	CCDC172	P0C7W6	258 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	GABRG2	P18507	467 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	HOXD12	P35452	270 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	DPP6	P42658	865 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	HARS2	P49590	506 aa	Known RBP	13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	DGKG	P49619	791 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	JAM2	P57087	298 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	ASIC2	Q16515	512 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	FYB2	Q5VWT5	728 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	RNF43	Q68DV7	783 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	TOGARAM2	Q6ZUX3	1019 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	FAM183BP	Q6ZVS7	135 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	ERICH1	Q86X53	443 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	DENND1C	Q8IV53	801 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	CPXM2	Q8N436	756 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	ADAM32	Q8TC27	787 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	EPS8L1	Q8TE68	723 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	CPA5	Q8WXQ8	436 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	TRIM62	Q9BVG3	475 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	SLC4A5	Q9BY07	1137 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	LHX5	Q9H2C1	402 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	CALCOCO1	Q9P1Z2	691 aa		13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
FDPS-204	ENST00000461507	PAPSS1	O43252	624 aa	Predicted RBP	13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	ERBB2	P04626	1255 aa		13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	PML	P29590	882 aa		13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	CHKA	P35790	457 aa		13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	RNASE9	P60153	205 aa	Known RBP	13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	CDR2	Q01850	454 aa		13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	ENPP2	Q13822	863 aa		13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	PTPN20	Q4JDL3	420 aa		13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	C2CD6	Q53TS8	623 aa		13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	LPCAT2	Q7L5N7	544 aa		13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	ZNF677	Q86XU0	584 aa		13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	FRMD1	Q8N878	549 aa		13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	STK32A	Q8WU08	396 aa		13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	RLN3	Q8WXF3	142 aa		13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	RNF34	Q969K3	372 aa		13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	PLD4	Q96BZ4	506 aa		13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	ACOX2	Q99424	681 aa		13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	FAM204A	Q9H8W3	233 aa		13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	STOML2	Q9UJZ1	356 aa		13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	NAALADL1	Q9UQQ1	740 aa		13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	CEP295	Q9C0D2	2601 aa		13.22	□□□□□ -0.29
FDPS-204	ENST00000461507	USP24	Q9UPU5	2620 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507		A0A1W2PQC6	194 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	LRRC53	A6NM62	1247 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	KHNYN	O15037	678 aa	Known RBP	13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	NPC1	O15118	1278 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	CBFA2T2	O43439	604 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	LSM8	O95777	96 aa	Known RBP	13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	MOCS2	O96007	188 aa	Predicted RBP	13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	FER	P16591	822 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	NDUFV2	P19404	249 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	PTGER3	P43115	390 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	NSF	P46459	744 aa	Known RBP	13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	DHPS	P49366	369 aa	Predicted RBP	13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	TBX4	P57082	545 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	TAF5	Q15542	800 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	TRIP4	Q15650	581 aa	Predicted RBP	13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	DCAF6	Q58WW2	860 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	EFHC1	Q5JVL4	640 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	KIAA1211L	Q6NV74	962 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	SLC36A4	Q6YBV0	504 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms