RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 EMC1Q8N766 993 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 ATP6V0D2Q8N8Y2 350 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 JOSD2Q8TAC2 188 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 TTC8Q8TAM2 541 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 RIN3Q8TB24 985 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 ADAM32Q8TC27 787 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 EXOC4Q96A65 974 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 CALR3Q96L12 384 aaKnown RBP9.54□□□□□ -0.88
RFX3-207ENST00000449190 DDX50Q9BQ39 737 aaKnown RBP9.54□□□□□ -0.88
RFX3-207ENST00000449190 CNPY3Q9BT09 278 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 NUP85Q9BW27 656 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 LINC00597Q9H2U6 94 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 CHRDQ9H2X0 955 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 EBF3Q9H4W6 596 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 ECT2Q9H8V3 914 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.54□□□□□ -0.881e-9■■■■□ 20.1
RFX3-207ENST00000449190 TBC1D14Q9P2M4 693 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 IP6K2Q9UHH9 426 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 FBXO4Q9UKT5 387 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 NENFQ9UMX5 172 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 NDRG2Q9UN36 371 aaKnown RBP9.54□□□□□ -0.88
RFX3-207ENST00000449190 TLR6Q9Y2C9 796 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 C5orf42Q9H799 3197 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 MUC3AQ02505 3323 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 OTOL1A6NHN0 477 aaPredicted RBP9.53□□□□□ -0.88
RFX3-207ENST00000449190 C2CD4BA6NLJ0 364 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 GJB6O95452 261 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 ARSAP15289 507 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 RDXP35241 583 aaKnown RBP9.53□□□□□ -0.88
RFX3-207ENST00000449190 FLT3P36888 993 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 NBL1P41271 181 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 PTPN9P43378 593 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 GALK1P51570 392 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 ATP11AP98196 1134 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 RING1Q06587 406 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 KIF5AQ12840 1032 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 LRRC32Q14392 662 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 PIGHQ14442 188 aaPredicted RBP9.53□□□□□ -0.88
RFX3-207ENST00000449190 ACAP1Q15027 740 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 IFI16Q16666 785 aaKnown RBP9.53□□□□□ -0.88
RFX3-207ENST00000449190 CDO1Q16878 200 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 EML3Q32P44 896 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 ZNF528Q3MIS6 628 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 ARL13BQ3SXY8 428 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 CCDC14Q49A88 953 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 BRMS1LQ5PSV4 323 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 PPP1R15BQ5SWA1 713 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 TRIM68Q6AZZ1 485 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 SCYL2Q6P3W7 929 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 TXNDC11Q6PKC3 985 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 HTR3DQ70Z44 454 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 STRADAQ7RTN6 431 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 TMEM139Q8IV31 216 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 CPA6Q8N4T0 437 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 SLC35G2Q8TBE7 412 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 ZNF564Q8TBZ8 553 aaPredicted RBP9.53□□□□□ -0.88
RFX3-207ENST00000449190 FAM172AQ8WUF8 416 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 ATP2A3Q93084 1043 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 OTUB2Q96DC9 234 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 ARHGEF26Q96DR7 871 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 PGAP3Q96FM1 320 aaPredicted RBP9.53□□□□□ -0.88
RFX3-207ENST00000449190 CFAP57Q96MR6 1250 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 PPP1R9BQ96SB3 815 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 TBCBQ99426 244 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 NPY6RQ99463 290 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 PACSIN1Q9BY11 444 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 SEMA4AQ9H3S1 761 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 WDCPQ9H6R7 721 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 SPATA6Q9NWH7 488 aaPredicted RBP9.53□□□□□ -0.88
RFX3-207ENST00000449190 ANAPC7Q9UJX3 599 aa9.53□□□□□ -0.88
RFX3-207ENST00000449190 F5P12259 2224 aa9.52□□□□□ -0.88
RFX3-207ENST00000449190 TCRBV5S1A1TA0A578 114 aa9.52□□□□□ -0.89
RFX3-207ENST00000449190 IRAK2O43187 625 aa9.52□□□□□ -0.89
RFX3-207ENST00000449190 MSI1O43347 362 aaKnown RBP9.52□□□□□ -0.89
RFX3-207ENST00000449190 STC2O76061 302 aa9.52□□□□□ -0.89
RFX3-207ENST00000449190 NFATC1O95644 943 aa9.52□□□□□ -0.89
RFX3-207ENST00000449190 LATS1O95835 1130 aa9.52□□□□□ -0.89
RFX3-207ENST00000449190 MOCS2O96007 188 aaPredicted RBP9.52□□□□□ -0.89
RFX3-207ENST00000449190 CYBBP04839 570 aa9.52□□□□□ -0.89
RFX3-207ENST00000449190 CCDC175P0C221 793 aa9.52□□□□□ -0.89
RFX3-207ENST00000449190 SP9P0CG40 484 aa9.52□□□□□ -0.89
RFX3-207ENST00000449190 CORO1AP31146 461 aaKnown RBP9.52□□□□□ -0.89
RFX3-207ENST00000449190 GJA4P35212 333 aa9.52□□□□□ -0.89
RFX3-207ENST00000449190 CHKAP35790 457 aa9.52□□□□□ -0.89
RFX3-207ENST00000449190 ARHGAP25P42331 645 aa9.52□□□□□ -0.89
RFX3-207ENST00000449190 SSR1P43307 286 aaKnown RBP9.52□□□□□ -0.89
RFX3-207ENST00000449190 VAV2P52735 878 aa9.52□□□□□ -0.89
RFX3-207ENST00000449190 RPL7AP62424 266 aaKnown RBP9.52□□□□□ -0.89
RFX3-207ENST00000449190 GRSF1Q12849 480 aaKnown RBP eCLIP9.52□□□□□ -0.89
RFX3-207ENST00000449190 PPP2R5DQ14738 602 aa9.52□□□□□ -0.89
RFX3-207ENST00000449190 PON2Q15165 354 aa9.52□□□□□ -0.89
RFX3-207ENST00000449190 ZC3H12AQ5D1E8 599 aaKnown RBP9.52□□□□□ -0.89
RFX3-207ENST00000449190 TMEM196Q5HYL7 178 aa9.52□□□□□ -0.89
RFX3-207ENST00000449190 ACBD5Q5T8D3 534 aaPredicted RBP9.52□□□□□ -0.89
RFX3-207ENST00000449190 DMRTA1Q5VZB9 504 aa9.52□□□□□ -0.89
RFX3-207ENST00000449190 ALYREFQ86V81 257 aaKnown RBP9.52□□□□□ -0.89
RFX3-207ENST00000449190 DENND1CQ8IV53 801 aa9.52□□□□□ -0.89
RFX3-207ENST00000449190 MAML2Q8IZL2 1156 aaPredicted RBP9.52□□□□□ -0.89
RFX3-207ENST00000449190 SPEM1Q8N4L4 309 aa9.52□□□□□ -0.89
RFX3-207ENST00000449190 ACRBPQ8NEB7 543 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms