RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 MAGEA12P43365 314 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 IRF5Q13568 498 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 CST9Q5W186 159 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 TREML1Q86YW5 311 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 CDKL3Q8IVW4 592 aaPredicted RBP15.88■□□□□ 0.13
CPSF7-202ENST00000394888 KLHDC8BQ8IXV7 354 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 ZNF567Q8N184 647 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 TOP6BLQ8N6T0 577 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 SPATA13Q96N96 652 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 TMEM120AQ9BXJ8 343 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 RCOR3Q9P2K3 495 aaPredicted RBP15.88■□□□□ 0.13
CPSF7-202ENST00000394888 DCTN4Q9UJW0 460 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 WDR27A2RRH5 827 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 F5H423 210 aaPredicted RBP15.88■□□□□ 0.13
CPSF7-202ENST00000394888 F7P08709 466 aaPredicted RBP15.88■□□□□ 0.13
CPSF7-202ENST00000394888 GSTA2P09210 222 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 RINLQ6ZS11 566 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 MARK2Q7KZI7 788 aaKnown RBP15.88■□□□□ 0.13
CPSF7-202ENST00000394888 TSSK1BQ9BXA7 367 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 SERPINB3P29508 390 aa15.87■□□□□ 0.13
CPSF7-202ENST00000394888 WSCD1Q658N2 575 aa15.87■□□□□ 0.13
CPSF7-202ENST00000394888 RHOBTB2Q9BYZ6 727 aa15.87■□□□□ 0.13
CPSF7-202ENST00000394888 EIF2B3Q9NR50 452 aaKnown RBP15.87■□□□□ 0.13
CPSF7-202ENST00000394888 CRHR1P34998 444 aa15.87■□□□□ 0.13
CPSF7-202ENST00000394888 PURAQ00577 322 aaKnown RBP15.87■□□□□ 0.13
CPSF7-202ENST00000394888 ALYREFQ86V81 257 aaKnown RBP15.87■□□□□ 0.13
CPSF7-202ENST00000394888 SHKBP1Q8TBC3 707 aa15.87■□□□□ 0.13
CPSF7-202ENST00000394888 RNF139Q8WU17 664 aa15.87■□□□□ 0.13
CPSF7-202ENST00000394888 KCNK16Q96T55 309 aa15.87■□□□□ 0.13
CPSF7-202ENST00000394888 DENND2DQ9H6A0 471 aaPredicted RBP15.87■□□□□ 0.13
CPSF7-202ENST00000394888 YJEFN3A6XGL0 299 aa15.87■□□□□ 0.13
CPSF7-202ENST00000394888 E7ENQ6 273 aa15.87■□□□□ 0.13
CPSF7-202ENST00000394888 DCTN3O75935 186 aa15.87■□□□□ 0.13
CPSF7-202ENST00000394888 NPR3P17342 541 aa15.87■□□□□ 0.13
CPSF7-202ENST00000394888 TAF6P49848 677 aa15.87■□□□□ 0.13
CPSF7-202ENST00000394888 CRYBB1P53674 252 aaPredicted RBP15.87■□□□□ 0.13
CPSF7-202ENST00000394888 CDK16Q00536 496 aa15.87■□□□□ 0.13
CPSF7-202ENST00000394888 BST1Q10588 318 aa15.87■□□□□ 0.13
CPSF7-202ENST00000394888 SCAPQ12770 1279 aa15.87■□□□□ 0.13
CPSF7-202ENST00000394888 LRRC8BQ6P9F7 803 aa15.87■□□□□ 0.13
CPSF7-202ENST00000394888 PSTKQ8IV42 348 aaKnown RBP15.87■□□□□ 0.13
CPSF7-202ENST00000394888 ENDOVQ8N8Q3 282 aaKnown RBP15.87■□□□□ 0.13
CPSF7-202ENST00000394888 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.87■□□□□ 0.13
CPSF7-202ENST00000394888 ISL2Q96A47 359 aa15.87■□□□□ 0.13
CPSF7-202ENST00000394888 C7orf26Q96N11 449 aa15.87■□□□□ 0.13
CPSF7-202ENST00000394888 LAMA3Q16787 3333 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 ZNF195O14628 629 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 ANP32DO95626 131 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 CD4P01730 458 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 APPL2Q8NEU8 664 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 SAR1AQ9NR31 198 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 HEY2Q9UBP5 337 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 CPA4Q9UI42 421 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 STK38LQ9Y2H1 464 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 C9IYK1 514 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 SNRPAP09012 282 aaKnown RBP15.86■□□□□ 0.13
CPSF7-202ENST00000394888 FGF3P11487 239 aaPredicted RBP15.86■□□□□ 0.13
CPSF7-202ENST00000394888 PTPN1P18031 435 aaKnown RBP15.86■□□□□ 0.13
CPSF7-202ENST00000394888 GJA9P57773 515 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 MBLAC2Q68D91 279 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 TTC8Q8TAM2 541 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 PLA2G4CQ9UP65 541 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 MIA3Q5JRA6 1907 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 RNF103O00237 685 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 TOMM70O94826 608 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 INHBAP08476 426 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 PGFP49763 221 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 SULT1E1P49888 294 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 MGAT3Q09327 533 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 MAP2K5Q13163 448 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 PDE1CQ14123 709 aaPredicted RBP15.86■□□□□ 0.13
CPSF7-202ENST00000394888 VPS52Q8N1B4 723 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 PDCD7Q8N8D1 485 aaKnown RBP15.86■□□□□ 0.13
CPSF7-202ENST00000394888 TFB1MQ8WVM0 346 aaKnown RBP15.86■□□□□ 0.13
CPSF7-202ENST00000394888 TTC17Q96AE7 1141 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 NMUR2Q9GZQ4 415 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 ZNF408Q9H9D4 720 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 TXLNGQ9NUQ3 528 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 SYBUQ9NX95 663 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 C15orf41Q9Y2V0 281 aa15.86■□□□□ 0.13
CPSF7-202ENST00000394888 HACD1B0YJ81 288 aa15.85■□□□□ 0.13
CPSF7-202ENST00000394888 ITM2AO43736 263 aa15.85■□□□□ 0.13
CPSF7-202ENST00000394888 MLNP12872 115 aa15.85■□□□□ 0.13
CPSF7-202ENST00000394888 PSMB4P28070 264 aa15.85■□□□□ 0.13
CPSF7-202ENST00000394888 CAP1Q01518 475 aa15.85■□□□□ 0.13
CPSF7-202ENST00000394888 PGAP3Q96FM1 320 aaPredicted RBP15.85■□□□□ 0.13
CPSF7-202ENST00000394888 SORT1Q99523 831 aa15.85■□□□□ 0.13
CPSF7-202ENST00000394888 MLPHQ9BV36 600 aaPredicted RBP15.85■□□□□ 0.13
CPSF7-202ENST00000394888 ACADSBP45954 432 aa15.85■□□□□ 0.13
CPSF7-202ENST00000394888 ZNF449Q6P9G9 518 aa15.85■□□□□ 0.13
CPSF7-202ENST00000394888 C4orf22Q6V702 233 aa15.85■□□□□ 0.13
CPSF7-202ENST00000394888 COLGALT1Q8NBJ5 622 aa15.85■□□□□ 0.13
CPSF7-202ENST00000394888 ACVR1CQ8NER5 493 aa15.85■□□□□ 0.13
CPSF7-202ENST00000394888 TSPAN18Q96SJ8 248 aa15.85■□□□□ 0.13
CPSF7-202ENST00000394888 SNX10Q9Y5X0 201 aa15.85■□□□□ 0.13
CPSF7-202ENST00000394888 MYBPHLA2RUH7 354 aa15.84■□□□□ 0.13
CPSF7-202ENST00000394888 CAPN15O75808 1086 aa15.84■□□□□ 0.13
CPSF7-202ENST00000394888 CHRNA1P02708 482 aa15.84■□□□□ 0.13
CPSF7-202ENST00000394888 BPGMP07738 259 aa15.84■□□□□ 0.13
CPSF7-202ENST00000394888 TPBGLP0DKB5 382 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms