RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 SCUBE2Q9NQ36 999 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 KCND2Q9NZV8 630 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 POLIQ9UNA4 740 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 KCNE2Q9Y6J6 123 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 MINK1Q8N4C8 1332 aaPredicted RBP8.84□□□□□ -0.99
TDP1-201ENST00000335725 ANKRD26Q9UPS8 1709 aa8.83□□□□□ -1
TDP1-201ENST00000335725 USP12O75317 370 aa8.83□□□□□ -1
TDP1-201ENST00000335725 TRIM16O95361 564 aa8.83□□□□□ -1
TDP1-201ENST00000335725 EIF2AK2P19525 551 aaKnown RBP8.83□□□□□ -1
TDP1-201ENST00000335725 ACAT1P24752 427 aaKnown RBP8.83□□□□□ -1
TDP1-201ENST00000335725 OTUD4Q01804 1114 aaKnown RBP8.83□□□□□ -1
TDP1-201ENST00000335725 GRSF1Q12849 480 aaKnown RBP eCLIP8.83□□□□□ -1
TDP1-201ENST00000335725 BFSP1Q12934 665 aa8.83□□□□□ -1
TDP1-201ENST00000335725 PLEKHG4Q58EX7 1191 aa8.83□□□□□ -1
TDP1-201ENST00000335725 LACC1Q8IV20 430 aa8.83□□□□□ -1
TDP1-201ENST00000335725 LRRC57Q8N9N7 239 aa8.83□□□□□ -1
TDP1-201ENST00000335725 LEMD2Q8NC56 503 aa8.83□□□□□ -1
TDP1-201ENST00000335725 OR7D4Q8NG98 312 aa8.83□□□□□ -1
TDP1-201ENST00000335725 PIP5K1AQ99755 562 aa8.83□□□□□ -1
TDP1-201ENST00000335725 CLSTN3Q9BQT9 956 aa8.83□□□□□ -1
TDP1-201ENST00000335725 C9orf16Q9BUW7 83 aa8.83□□□□□ -1
TDP1-201ENST00000335725 DNAJC5Q9H3Z4 198 aa8.83□□□□□ -1
TDP1-201ENST00000335725 KCNK13Q9HB14 408 aa8.83□□□□□ -1
TDP1-201ENST00000335725 EDARQ9UNE0 448 aa8.83□□□□□ -1
TDP1-201ENST00000335725 ATP8B3O60423 1300 aa8.83□□□□□ -1
TDP1-201ENST00000335725 MYH4Q9Y623 1939 aa8.83□□□□□ -1
TDP1-201ENST00000335725 DLC1Q96QB1 1528 aa8.83□□□□□ -1
TDP1-201ENST00000335725 A0A1W2PRG6 482 aa8.83□□□□□ -1
TDP1-201ENST00000335725 TRIM49BA6NDI0 452 aa8.83□□□□□ -1
TDP1-201ENST00000335725 LACTBL1A8MY62 500 aa8.83□□□□□ -1
TDP1-201ENST00000335725 CYP26A1O43174 497 aa8.83□□□□□ -1
TDP1-201ENST00000335725 GATCO43716 136 aaKnown RBP8.83□□□□□ -1
TDP1-201ENST00000335725 ASNSP08243 561 aa8.83□□□□□ -1
TDP1-201ENST00000335725 NCAM1P13591 858 aa8.83□□□□□ -1
TDP1-201ENST00000335725 GDI2P50395 445 aaKnown RBP8.83□□□□□ -1
TDP1-201ENST00000335725 CAV1Q03135 178 aa8.83□□□□□ -1
TDP1-201ENST00000335725 GALNT2Q10471 571 aa8.83□□□□□ -1
TDP1-201ENST00000335725 ADGRE1Q14246 886 aa8.83□□□□□ -1
TDP1-201ENST00000335725 KIAA0408Q6ZU52 694 aa8.83□□□□□ -1
TDP1-201ENST00000335725 CHERPQ8IWX8 916 aaKnown RBP8.83□□□□□ -1
TDP1-201ENST00000335725 LARGE2Q8N3Y3 721 aa8.83□□□□□ -1
TDP1-201ENST00000335725 ZCCHC7Q8N3Z6 543 aaKnown RBP8.83□□□□□ -1
TDP1-201ENST00000335725 TSSK1BQ9BXA7 367 aa8.83□□□□□ -1
TDP1-201ENST00000335725 NUSAP1Q9BXS6 441 aaKnown RBP8.83□□□□□ -1
TDP1-201ENST00000335725 TMEM245Q9H330 911 aa8.83□□□□□ -1
TDP1-201ENST00000335725 TRABDQ9H4I3 376 aa8.83□□□□□ -1
TDP1-201ENST00000335725 HPS4Q9NQG7 708 aa8.83□□□□□ -1
TDP1-201ENST00000335725 ARHGEF4Q9NR80 690 aa8.83□□□□□ -1
TDP1-201ENST00000335725 FBXO6Q9NRD1 293 aaPredicted RBP8.83□□□□□ -1
TDP1-201ENST00000335725 PIH1D1Q9NWS0 290 aaKnown RBP8.83□□□□□ -1
TDP1-201ENST00000335725 REV1Q9UBZ9 1251 aa8.83□□□□□ -1
TDP1-201ENST00000335725 KLQ9UEF7 1012 aa8.83□□□□□ -1
TDP1-201ENST00000335725 PCYOX1Q9UHG3 505 aa8.83□□□□□ -1
TDP1-201ENST00000335725 ENPP5Q9UJA9 477 aa8.83□□□□□ -1
TDP1-201ENST00000335725 RIPK3Q9Y572 518 aa8.83□□□□□ -1
TDP1-201ENST00000335725 PCDHB13Q9Y5F0 798 aa8.83□□□□□ -1
TDP1-201ENST00000335725 CPDO75976 1380 aa8.83□□□□□ -1
TDP1-201ENST00000335725 MYO5AQ9Y4I1 1855 aaKnown RBP8.83□□□□□ -1
TDP1-201ENST00000335725 UBAP1LF5GYI3 381 aa8.83□□□□□ -1
TDP1-201ENST00000335725 ARHGEF9O43307 516 aa8.83□□□□□ -1
TDP1-201ENST00000335725 DNASE1L3Q13609 305 aa8.83□□□□□ -1
TDP1-201ENST00000335725 TMED2Q15363 201 aa8.83□□□□□ -1
TDP1-201ENST00000335725 ZNF568Q3ZCX4 644 aa8.83□□□□□ -1
TDP1-201ENST00000335725 ZNF544Q6NX49 715 aa8.83□□□□□ -1
TDP1-201ENST00000335725 USP49Q70CQ1 688 aa8.83□□□□□ -1
TDP1-201ENST00000335725 DSG4Q86SJ6 1040 aa8.83□□□□□ -1
TDP1-201ENST00000335725 CDH24Q86UP0 819 aa8.83□□□□□ -1
TDP1-201ENST00000335725 KBTBD6Q86V97 674 aa8.83□□□□□ -1
TDP1-201ENST00000335725 SLC22A16Q86VW1 577 aa8.83□□□□□ -1
TDP1-201ENST00000335725 MICU2Q8IYU8 434 aa8.83□□□□□ -1
TDP1-201ENST00000335725 IFNL3Q8IZI9 196 aa8.83□□□□□ -1
TDP1-201ENST00000335725 CELF1Q92879 486 aaKnown RBP8.83□□□□□ -1
TDP1-201ENST00000335725 MARC2Q969Z3 335 aa8.83□□□□□ -1
TDP1-201ENST00000335725 BLZF1Q9H2G9 400 aa8.83□□□□□ -1
TDP1-201ENST00000335725 EPS8L2Q9H6S3 715 aa8.83□□□□□ -1
TDP1-201ENST00000335725 PPCSQ9HAB8 311 aa8.83□□□□□ -1
TDP1-201ENST00000335725 POLE3Q9NRF9 147 aa8.83□□□□□ -1
TDP1-201ENST00000335725 C20orf96Q9NUD7 363 aaPredicted RBP8.83□□□□□ -1
TDP1-201ENST00000335725 MAT2BQ9NZL9 334 aa8.83□□□□□ -1
TDP1-201ENST00000335725 KANSL3Q9P2N6 904 aa8.83□□□□□ -1
TDP1-201ENST00000335725 C17orf113A0A1B0GUU1 675 aa8.82□□□□□ -1
TDP1-201ENST00000335725 TRIM75PA6NK02 468 aa8.82□□□□□ -1
TDP1-201ENST00000335725 CDH5P33151 784 aaPredicted RBP8.82□□□□□ -1
TDP1-201ENST00000335725 METAP2P50579 478 aaKnown RBP eCLIP8.82□□□□□ -1
TDP1-201ENST00000335725 AP1S2P56377 157 aa8.82□□□□□ -1
TDP1-201ENST00000335725 TTC39BQ5VTQ0 682 aaPredicted RBP8.82□□□□□ -1
TDP1-201ENST00000335725 NIPA1Q7RTP0 329 aa8.82□□□□□ -1
TDP1-201ENST00000335725 BAP1Q92560 729 aa8.82□□□□□ -1
TDP1-201ENST00000335725 LPGAT1Q92604 370 aa8.82□□□□□ -1
TDP1-201ENST00000335725 CCDC120Q96HB5 630 aa8.82□□□□□ -1
TDP1-201ENST00000335725 KCNK16Q96T55 309 aa8.82□□□□□ -1
TDP1-201ENST00000335725 DHX33Q9H6R0 707 aaKnown RBP8.82□□□□□ -1
TDP1-201ENST00000335725 CNNM1Q9NRU3 951 aa8.82□□□□□ -1
TDP1-201ENST00000335725 POLG2Q9UHN1 485 aa8.82□□□□□ -1
TDP1-201ENST00000335725 SLC24A2Q9UI40 661 aa8.82□□□□□ -1
TDP1-201ENST00000335725 MRPS7Q9Y2R9 242 aaKnown RBP8.82□□□□□ -1
TDP1-201ENST00000335725 A0A0A6YYK5 440 aaPredicted RBP8.82□□□□□ -1
TDP1-201ENST00000335725 AURKAO14965 403 aa8.82□□□□□ -1
TDP1-201ENST00000335725 ADAMTS4O75173 837 aa8.82□□□□□ -1
TDP1-201ENST00000335725 GGPS1O95749 300 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms