RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 PRMT7Q9NVM4 692 aaPredicted RBP17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 EHD3Q9NZN3 535 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 CROTQ9UKG9 612 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 PLAGL2Q9UPG8 496 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 TSPAN9O75954 239 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 CLTBP09497 229 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 ERVK-10P10266 1014 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 KRR1Q13601 381 aaKnown RBP17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 RNASE11Q8TAA1 199 aaKnown RBP17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 MAGEE2Q8TD90 523 aaPredicted RBP17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 SMPD4Q9NXE4 827 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 NPHP4O75161 1426 aaPredicted RBP17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 SCUBE3Q8IX30 993 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 BPIFB6Q8NFQ5 453 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 ACTL9Q8TC94 416 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 PCDH8O95206 1070 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 S100A9P06702 114 aaKnown RBP17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 GUCA1AP43080 201 aaPredicted RBP17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 ALDH7A1P49419 539 aaKnown RBP17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 SERPINH1P50454 418 aaKnown RBP17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 SLC25A3Q00325 362 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 CASP12Q6UXS9 341 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 NSMCE2Q96MF7 247 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 RBM22Q9NW64 420 aaKnown RBP eCLIP17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 PRKAG3Q9UGI9 489 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 RBMX2Q9Y388 322 aaKnown RBP17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 LAMC1P11047 1609 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 KCNK1O00180 336 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 SLC25A24Q6NUK1 477 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 SCIMPQ6UWF3 145 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 SYN2Q92777 582 aaPredicted RBP17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 BTBD7Q9P203 1132 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 NDUFAF1Q9Y375 327 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 CKMP06732 381 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 TKTL1P51854 596 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 RAD23AP54725 363 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 ZNF844Q08AG5 666 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 KCNMB4Q86W47 210 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 SEMA4BQ9NPR2 832 aaPredicted RBP17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 SNTG2Q9NY99 539 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 NINJ2Q9NZG7 142 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 IDH3BO43837 385 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 PIK3R1P27986 724 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 ITGB3BPQ13352 177 aaPredicted RBP17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 WDR93Q6P2C0 686 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 NCKIPSDQ9NZQ3 722 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 CDC42BPGQ6DT37 1551 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 RFX7Q2KHR2 1363 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 DSG4Q86SJ6 1040 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 ZNF75CPQ92670 426 aaPredicted RBP17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 STON1Q9Y6Q2 735 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 BTN3A3O00478 584 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 KPNA4O00629 521 aaPredicted RBP17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 AHCYL1O43865 530 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 RHOCP08134 193 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 MAGEA10P43363 369 aaPredicted RBP17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 PHKG1Q16816 387 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 C16orf62Q7Z3J2 963 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 FAM45AQ8TCE6 357 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 RORBQ92753 470 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 TRIM63Q969Q1 353 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 DCLK3Q9C098 648 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 PDGFCQ9NRA1 345 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 ABCB10Q9NRK6 738 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 DNPEPQ9ULA0 475 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 SMIM31A0A1B0GVY4 71 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 VAPBO95292 243 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 CCR4P51679 360 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 PTPAQ15257 358 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 PWWP2AQ96N64 755 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 ACSS2Q9NR19 701 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 NCAPD2Q15021 1401 aa17.17■□□□□ 0.34
TSPAN3-201ENST00000267970 C17orf102A2RUQ5 167 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 FAM220BPB1ANY3 271 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 MRASO14807 208 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 TBX3O15119 743 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 ACTRT1Q8TDG2 376 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 TRAPPC9Q96Q05 1148 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 PCDHGA3Q9Y5H0 932 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 HBP1O60381 514 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 TSPAN19P0C672 248 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 PECAM1P16284 738 aaPredicted RBP17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 PRKAG1P54619 331 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 PAPD7Q5XG87 772 aaKnown RBP17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 MAGI3Q5TCQ9 1506 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 FAM237BA0A1B0GVD1 139 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 HLA-DQA2P01906 255 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 ADRA1DP25100 572 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 ATN1P54259 1190 aaPredicted RBP17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 ADIGQ0VDE8 80 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 UBAP2LQ14157 1087 aaKnown RBP17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 CERKQ8TCT0 537 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 SPACA7Q96KW9 195 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 EPB41L1Q9H4G0 881 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 FAM205AQ6ZU69 1335 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 SNTNA6NMZ2 147 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 PROSER1Q86XN7 944 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 SLC41A1Q8IVJ1 513 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 A1CFQ9NQ94 594 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms