RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 TULP2O00295 520 aa16.37■□□□□ 0.21
USB1-208ENST00000563207 TM4SF5O14894 197 aa16.37■□□□□ 0.21
USB1-208ENST00000563207 HOXC11O43248 304 aaPredicted RBP16.37■□□□□ 0.21
USB1-208ENST00000563207 LSM8O95777 96 aaKnown RBP16.37■□□□□ 0.21
USB1-208ENST00000563207 KLKB1P03952 638 aa16.37■□□□□ 0.21
USB1-208ENST00000563207 ATP5C1P36542 298 aaKnown RBP16.37■□□□□ 0.21
USB1-208ENST00000563207 EIF2DP41214 584 aaKnown RBP16.37■□□□□ 0.21
USB1-208ENST00000563207 RPL34P49207 117 aaKnown RBP16.37■□□□□ 0.21
USB1-208ENST00000563207 PSEN1P49768 467 aa16.37■□□□□ 0.21
USB1-208ENST00000563207 CDR2Q01850 454 aa16.37■□□□□ 0.21
USB1-208ENST00000563207 STPG1Q5TH74 334 aa16.37■□□□□ 0.21
USB1-208ENST00000563207 SFMBT2Q5VUG0 894 aa16.37■□□□□ 0.21
USB1-208ENST00000563207 TRIM72Q6ZMU5 477 aa16.37■□□□□ 0.21
USB1-208ENST00000563207 HTR3DQ70Z44 454 aa16.37■□□□□ 0.21
USB1-208ENST00000563207 CCDC186Q7Z3E2 898 aa16.37■□□□□ 0.21
USB1-208ENST00000563207 SCML4Q8N228 414 aa16.37■□□□□ 0.21
USB1-208ENST00000563207 OLIG1Q8TAK6 271 aa16.37■□□□□ 0.21
USB1-208ENST00000563207 HMGB4Q8WW32 186 aa16.37■□□□□ 0.21
USB1-208ENST00000563207 DDX1Q92499 740 aaKnown RBP16.37■□□□□ 0.21
USB1-208ENST00000563207 MRFAP1L1Q96HT8 127 aa16.37■□□□□ 0.21
USB1-208ENST00000563207 PDCL3Q9H2J4 239 aa16.37■□□□□ 0.21
USB1-208ENST00000563207 PLK2Q9NYY3 685 aa16.37■□□□□ 0.21
USB1-208ENST00000563207 MBD1Q9UIS9 605 aaPredicted RBP16.37■□□□□ 0.21
USB1-208ENST00000563207 NAGPAQ9UK23 515 aa16.37■□□□□ 0.21
USB1-208ENST00000563207 TNRC6BQ9UPQ9 1833 aaKnown RBP16.37■□□□□ 0.21
USB1-208ENST00000563207 BCLAF3A2AJT9 711 aaKnown RBP16.36■□□□□ 0.21
USB1-208ENST00000563207 LRRC53A6NM62 1247 aa16.36■□□□□ 0.21
USB1-208ENST00000563207 PRRT4C9JH25 899 aa16.36■□□□□ 0.21
USB1-208ENST00000563207 NEDD8-MDP1E9PL57 170 aa16.36■□□□□ 0.21
USB1-208ENST00000563207 CALCAP01258 141 aa16.36■□□□□ 0.21
USB1-208ENST00000563207 HMBSP08397 361 aa16.36■□□□□ 0.21
USB1-208ENST00000563207 CDH5P33151 784 aaPredicted RBP16.36■□□□□ 0.21
USB1-208ENST00000563207 TNFRSF4P43489 277 aa16.36■□□□□ 0.21
USB1-208ENST00000563207 USP39Q53GS9 565 aaKnown RBP16.36■□□□□ 0.21
USB1-208ENST00000563207 C10orf120Q5SQS8 335 aa16.36■□□□□ 0.21
USB1-208ENST00000563207 C10orf76Q5T2E6 689 aa16.36■□□□□ 0.21
USB1-208ENST00000563207 EGFLAMQ63HQ2 1017 aa16.36■□□□□ 0.21
USB1-208ENST00000563207 PMS2CLQ68D20 193 aa16.36■□□□□ 0.21
USB1-208ENST00000563207 ARMCX6Q7L4S7 300 aa16.36■□□□□ 0.21
USB1-208ENST00000563207 IRF2BP2Q7Z5L9 587 aa16.36■□□□□ 0.21
USB1-208ENST00000563207 NOP9Q86U38 636 aaKnown RBP16.36■□□□□ 0.21
USB1-208ENST00000563207 ARHGAP18Q8N392 663 aa16.36■□□□□ 0.21
USB1-208ENST00000563207 DEFB119Q8N690 84 aa16.36■□□□□ 0.21
USB1-208ENST00000563207 TMEM35BQ8NCS4 154 aa16.36■□□□□ 0.21
USB1-208ENST00000563207 OTUB2Q96DC9 234 aa16.36■□□□□ 0.21
USB1-208ENST00000563207 CNGB3Q9NQW8 809 aa16.36■□□□□ 0.21
USB1-208ENST00000563207 DEC1Q9P2X7 70 aa16.36■□□□□ 0.21
USB1-208ENST00000563207 NOCTQ9UK39 431 aaKnown RBP16.36■□□□□ 0.21
USB1-208ENST00000563207 BZW2Q9Y6E2 419 aaKnown RBP16.36■□□□□ 0.21
USB1-208ENST00000563207 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 TCRBV21S2A2A0A5A6 115 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 SART1O43290 800 aaKnown RBP16.35■□□□□ 0.21
USB1-208ENST00000563207 AP5Z1O43299 807 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 STC2O76061 302 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 FBXO21O94952 628 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 GYPCP04921 128 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 TYRP14679 529 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 PRKCIP41743 596 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 ZNF75DP51815 510 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 TKTL1P51854 596 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 ARID5AQ03989 594 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 ELF2Q15723 593 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 ASIC2Q16515 512 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 BTBD8Q5XKL5 378 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 PM20D1Q6GTS8 502 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 PMF1Q6P1K2 205 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 DENND1BQ6P3S1 775 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 Q6ZNB5 142 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 TMEM110Q86TL2 294 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 TMEFF1Q8IYR6 380 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 SIX6OS1Q8N1H7 587 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 ZNF276Q8N554 614 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 ZNF513Q8N8E2 541 aaPredicted RBP16.35■□□□□ 0.21
USB1-208ENST00000563207 TERB1Q8NA31 727 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 BBS2Q9BXC9 721 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 SLC4A5Q9BY07 1137 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 MIS12Q9H081 205 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 SLC6A17Q9H1V8 727 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 DNAJC17Q9NVM6 304 aaKnown RBP16.35■□□□□ 0.21
USB1-208ENST00000563207 PCDHGA5Q9Y5G8 931 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 CEP192Q8TEP8 1941 aa16.35■□□□□ 0.21
USB1-208ENST00000563207 WASH3PC4AMC7 463 aa16.34■□□□□ 0.21
USB1-208ENST00000563207 RHOBTB1O94844 696 aa16.34■□□□□ 0.21
USB1-208ENST00000563207 ZBED1O96006 694 aa16.34■□□□□ 0.21
USB1-208ENST00000563207 ADRB1P08588 477 aa16.34■□□□□ 0.21
USB1-208ENST00000563207 GABRG2P18507 467 aa16.34■□□□□ 0.21
USB1-208ENST00000563207 CASP14P31944 242 aa16.34■□□□□ 0.21
USB1-208ENST00000563207 P2RY2P41231 377 aa16.34■□□□□ 0.21
USB1-208ENST00000563207 PTGER3P43115 390 aa16.34■□□□□ 0.21
USB1-208ENST00000563207 DHPSP49366 369 aaPredicted RBP16.34■□□□□ 0.21
USB1-208ENST00000563207 EFEMP1Q12805 493 aa16.34■□□□□ 0.21
USB1-208ENST00000563207 TSR1Q2NL82 804 aaKnown RBP16.34■□□□□ 0.21
USB1-208ENST00000563207 MAP7D1Q3KQU3 841 aa16.34■□□□□ 0.21
USB1-208ENST00000563207 KIAA1211LQ6NV74 962 aa16.34■□□□□ 0.21
USB1-208ENST00000563207 PPP1R2P3Q6NXS1 205 aa16.34■□□□□ 0.21
USB1-208ENST00000563207 DRC7Q8IY82 874 aa16.34■□□□□ 0.21
USB1-208ENST00000563207 MSANTD4Q8NCY6 345 aa16.34■□□□□ 0.21
USB1-208ENST00000563207 IRGQQ8WZA9 623 aa16.34■□□□□ 0.21
USB1-208ENST00000563207 CDK5RAP1Q96SZ6 601 aaKnown RBP16.34■□□□□ 0.21
USB1-208ENST00000563207 CD93Q9NPY3 652 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms