RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 PCDHA10Q9Y5I2 948 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 AGAP5A6NIR3 686 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 QSOX1O00391 747 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 FAM163BP0C2L3 166 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 XBP1P17861 261 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 GALNSP34059 522 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 VAMP2P63027 116 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 TLE3Q04726 772 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 RNASELQ05823 741 aaKnown RBP7.13□□□□□ -1.27
LEMD3-206ENST00000545026 DDX10Q13206 875 aaKnown RBP7.13□□□□□ -1.27
LEMD3-206ENST00000545026 TRPC3Q13507 836 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 SIM2Q14190 667 aaPredicted RBP7.13□□□□□ -1.27
LEMD3-206ENST00000545026 CTXN3Q4LDR2 81 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 AARS2Q5JTZ9 985 aaKnown RBP7.13□□□□□ -1.27
LEMD3-206ENST00000545026 ZNF484Q5JVG2 852 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 KIRREL2Q6UWL6 708 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 FAM71DQ8N9W8 422 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 BEND2Q8NDZ0 799 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 HTRA1Q92743 480 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 SEC62Q99442 399 aaKnown RBP7.13□□□□□ -1.27
LEMD3-206ENST00000545026 REEP2Q9BRK0 252 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 ZNF747Q9BV97 191 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 RMI1Q9H9A7 625 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 USP29Q9HBJ7 922 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 UBN1Q9NPG3 1134 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 ST3GAL5Q9UNP4 418 aa7.13□□□□□ -1.27
LEMD3-206ENST00000545026 NPIPB8E9PQR5 432 aa7.12□□□□□ -1.27
LEMD3-206ENST00000545026 CCT8P50990 548 aa7.12□□□□□ -1.27
LEMD3-206ENST00000545026 JAK3P52333 1124 aa7.12□□□□□ -1.27
LEMD3-206ENST00000545026 ANKRD1Q15327 319 aa7.12□□□□□ -1.27
LEMD3-206ENST00000545026 MAPRE1Q15691 268 aaKnown RBP7.12□□□□□ -1.27
LEMD3-206ENST00000545026 LRRC24Q50LG9 513 aa7.12□□□□□ -1.27
LEMD3-206ENST00000545026 PCID2Q5JVF3 399 aa7.12□□□□□ -1.27
LEMD3-206ENST00000545026 LAIR1Q6GTX8 287 aa7.12□□□□□ -1.27
LEMD3-206ENST00000545026 HEATR4Q86WZ0 1026 aa7.12□□□□□ -1.27
LEMD3-206ENST00000545026 LINC01465Q8N7H1 131 aa7.12□□□□□ -1.27
LEMD3-206ENST00000545026 USP38Q8NB14 1042 aa7.12□□□□□ -1.27
LEMD3-206ENST00000545026 KAZALD1Q96I82 304 aa7.12□□□□□ -1.27
LEMD3-206ENST00000545026 ELOVL1Q9BW60 279 aa7.12□□□□□ -1.27
LEMD3-206ENST00000545026 ARHGAP39Q9C0H5 1083 aa7.12□□□□□ -1.27
LEMD3-206ENST00000545026 ABHD10Q9NUJ1 306 aa7.12□□□□□ -1.27
LEMD3-206ENST00000545026 VPS4AQ9UN37 437 aa7.12□□□□□ -1.27
LEMD3-206ENST00000545026 TMEM98Q9Y2Y6 226 aa7.12□□□□□ -1.27
LEMD3-206ENST00000545026 ARID1BQ8NFD5 2236 aaPredicted RBP7.11□□□□□ -1.27
LEMD3-206ENST00000545026 TBC1D3DA0A087WVF3 549 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 TBC1D3IA0A087WXS9 549 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 TBC1D3EA0A087X179 549 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 TBC1D3KA0A087X1G2 549 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 TBC1D3BA6NDS4 549 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 TBC1D3FA6NER0 549 aaPredicted RBP7.11□□□□□ -1.27
LEMD3-206ENST00000545026 A6NLC8 198 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 TBC1D3LB9A6J9 549 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 SEPT4O43236 478 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 ZNF202O95125 648 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 TBC1D3HP0C7X1 549 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 APEHP13798 732 aaKnown RBP7.11□□□□□ -1.27
LEMD3-206ENST00000545026 TNFAIP3P21580 790 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 MATN1P21941 496 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 DUSP1P28562 367 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 GRK5P34947 590 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 LIFRP42702 1097 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 TAS2R50P59544 299 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 MPP1Q00013 466 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 CFHR3Q02985 330 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 MAPK7Q13164 816 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 ZNF169Q14929 603 aaPredicted RBP7.11□□□□□ -1.27
LEMD3-206ENST00000545026 TBC1D3GQ6DHY5 549 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 TBC1D3CQ6IPX1 549 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 SYNE3Q6ZMZ3 975 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 Q6ZPA2 131 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 TBC1D3Q8IZP1 549 aaPredicted RBP7.11□□□□□ -1.27
LEMD3-206ENST00000545026 FSIP1Q8NA03 581 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 CLEC4CQ8WTT0 213 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 PIGSQ96S52 555 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 HERC2P3Q9BVR0 1158 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 FZD4Q9ULV1 537 aa7.11□□□□□ -1.27
LEMD3-206ENST00000545026 VWA3AA6NCI4 1184 aa7.1□□□□□ -1.27
LEMD3-206ENST00000545026 ZNF213O14771 459 aa7.1□□□□□ -1.27
LEMD3-206ENST00000545026 HNRNPRO43390 633 aaKnown RBP7.1□□□□□ -1.27
LEMD3-206ENST00000545026 RHOBTB3O94955 611 aa7.1□□□□□ -1.27
LEMD3-206ENST00000545026 C1RP00736 705 aa7.1□□□□□ -1.27
LEMD3-206ENST00000545026 CHN1P15882 459 aa7.1□□□□□ -1.27
LEMD3-206ENST00000545026 DRD4P21917 467 aa7.1□□□□□ -1.27
LEMD3-206ENST00000545026 CXCR5P32302 372 aa7.1□□□□□ -1.27
LEMD3-206ENST00000545026 RCAN1P53805 252 aa7.1□□□□□ -1.27
LEMD3-206ENST00000545026 ATG16L1Q676U5 607 aa7.1□□□□□ -1.27
LEMD3-206ENST00000545026 WDR93Q6P2C0 686 aa7.1□□□□□ -1.27
LEMD3-206ENST00000545026 KYAT3Q6YP21 454 aaKnown RBP7.1□□□□□ -1.27
LEMD3-206ENST00000545026 ULK2Q8IYT8 1036 aa7.1□□□□□ -1.27
LEMD3-206ENST00000545026 PTGR2Q8N8N7 351 aaPredicted RBP7.1□□□□□ -1.27
LEMD3-206ENST00000545026 PPHLN1Q8NEY8 458 aaKnown RBP7.1□□□□□ -1.27
LEMD3-206ENST00000545026 LINS1Q8NG48 757 aa7.1□□□□□ -1.27
LEMD3-206ENST00000545026 LARP4BQ92615 738 aaKnown RBP7.1□□□□□ -1.27
LEMD3-206ENST00000545026 HVCN1Q96D96 273 aa7.1□□□□□ -1.27
LEMD3-206ENST00000545026 NPAS1Q99742 590 aa7.1□□□□□ -1.27
LEMD3-206ENST00000545026 GPR63Q9BZJ6 419 aa7.1□□□□□ -1.27
LEMD3-206ENST00000545026 SEMA5BQ9P283 1151 aa7.1□□□□□ -1.27
LEMD3-206ENST00000545026 LMTK3Q96Q04 1460 aa7.1□□□□□ -1.27
LEMD3-206ENST00000545026 CYP3A7-CYP3A51PA0A087WV96 503 aa7.09□□□□□ -1.27
LEMD3-206ENST00000545026 SAC3D1A6NKF1 404 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms