RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 CPXM2Q8N436 756 aa22.05■■□□□ 1.12
CHKA-206ENST00000531341 OR2T3Q8NH03 318 aa22.05■■□□□ 1.12
CHKA-206ENST00000531341 CYB5D2Q8WUJ1 264 aa22.05■■□□□ 1.12
CHKA-206ENST00000531341 NDRG1Q92597 394 aaKnown RBP22.05■■□□□ 1.12
CHKA-206ENST00000531341 ZNF396Q96N95 335 aaPredicted RBP22.05■■□□□ 1.12
CHKA-206ENST00000531341 DCLK3Q9C098 648 aa22.05■■□□□ 1.12
CHKA-206ENST00000531341 PCDHA7Q9UN72 937 aa22.05■■□□□ 1.12
CHKA-206ENST00000531341 ANKRD6Q9Y2G4 727 aa22.05■■□□□ 1.12
CHKA-206ENST00000531341 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.05■■□□□ 1.12
CHKA-206ENST00000531341 SLC12A8A0AV02 714 aa22.04■■□□□ 1.12
CHKA-206ENST00000531341 TSPAN3O60637 253 aa22.04■■□□□ 1.12
CHKA-206ENST00000531341 TRIM49P0CI25 452 aa22.04■■□□□ 1.12
CHKA-206ENST00000531341 TRIM49CP0CI26 452 aa22.04■■□□□ 1.12
CHKA-206ENST00000531341 GCLMP48507 274 aa22.04■■□□□ 1.12
CHKA-206ENST00000531341 PPP3CAQ08209 521 aa22.04■■□□□ 1.12
CHKA-206ENST00000531341 CAMK2GQ13555 558 aaPredicted RBP22.04■■□□□ 1.12
CHKA-206ENST00000531341 EIF4HQ15056 248 aaKnown RBP22.04■■□□□ 1.12
CHKA-206ENST00000531341 CCDC157Q569K6 752 aa22.04■■□□□ 1.12
CHKA-206ENST00000531341 FAM217AQ8IXS0 508 aa22.04■■□□□ 1.12
CHKA-206ENST00000531341 ZC3H3Q8IXZ2 948 aaKnown RBP22.04■■□□□ 1.12
CHKA-206ENST00000531341 BIRC7Q96CA5 298 aa22.04■■□□□ 1.12
CHKA-206ENST00000531341 ARID3AQ99856 593 aa22.04■■□□□ 1.12
CHKA-206ENST00000531341 TMEM245Q9H330 911 aa22.04■■□□□ 1.12
CHKA-206ENST00000531341 CYP3A43Q9HB55 503 aa22.04■■□□□ 1.12
CHKA-206ENST00000531341 MARCH2Q9P0N8 246 aa22.04■■□□□ 1.12
CHKA-206ENST00000531341 ACACAQ13085 2346 aa22.04■■□□□ 1.12
CHKA-206ENST00000531341 CKAP5Q14008 2032 aa22.04■■□□□ 1.12
CHKA-206ENST00000531341 PDXKO00764 312 aa22.03■■□□□ 1.12
CHKA-206ENST00000531341 CYBBP04839 570 aa22.03■■□□□ 1.12
CHKA-206ENST00000531341 HOXD9P28356 352 aaPredicted RBP22.03■■□□□ 1.12
CHKA-206ENST00000531341 HLA-FP30511 346 aa22.03■■□□□ 1.12
CHKA-206ENST00000531341 VAMP7P51809 220 aa22.03■■□□□ 1.12
CHKA-206ENST00000531341 IL9RQ01113 521 aa22.03■■□□□ 1.12
CHKA-206ENST00000531341 PTPRNQ16849 979 aa22.03■■□□□ 1.12
CHKA-206ENST00000531341 RESP18Q5W5W9 173 aa22.03■■□□□ 1.12
CHKA-206ENST00000531341 LHX5Q9H2C1 402 aa22.03■■□□□ 1.12
CHKA-206ENST00000531341 NUMA1Q14980 2115 aa22.03■■□□□ 1.12
CHKA-206ENST00000531341 H0Y8X5 98 aa22.02■■□□□ 1.12
CHKA-206ENST00000531341 PDIA4P13667 645 aaKnown RBP22.02■■□□□ 1.12
CHKA-206ENST00000531341 YWHAGP61981 247 aaKnown RBP eCLIP22.02■■□□□ 1.12
CHKA-206ENST00000531341 SUZ12Q15022 739 aaKnown RBP22.02■■□□□ 1.12
CHKA-206ENST00000531341 SMAD1Q15797 465 aaKnown RBP22.02■■□□□ 1.12
CHKA-206ENST00000531341 DHRS13Q6UX07 377 aa22.02■■□□□ 1.12
CHKA-206ENST00000531341 BHLHA9Q7RTU4 235 aa22.02■■□□□ 1.12
CHKA-206ENST00000531341 PAGE5Q96GU1 130 aa22.02■■□□□ 1.12
CHKA-206ENST00000531341 HEXIM2Q96MH2 286 aaKnown RBP22.02■■□□□ 1.12
CHKA-206ENST00000531341 CDK5RAP1Q96SZ6 601 aaKnown RBP22.02■■□□□ 1.12
CHKA-206ENST00000531341 ORAI3Q9BRQ5 295 aa22.02■■□□□ 1.12
CHKA-206ENST00000531341 SLC2A11Q9BYW1 496 aa22.02■■□□□ 1.12
CHKA-206ENST00000531341 PCED1AQ9H1Q7 454 aa22.02■■□□□ 1.12
CHKA-206ENST00000531341 MMRN2Q9H8L6 949 aa22.02■■□□□ 1.12
CHKA-206ENST00000531341 A0A087WV48 116 aa22.01■■□□□ 1.11
CHKA-206ENST00000531341 TULP2O00295 520 aa22.01■■□□□ 1.11
CHKA-206ENST00000531341 TNFSF14O43557 240 aa22.01■■□□□ 1.11
CHKA-206ENST00000531341 ACTN4O43707 911 aaKnown RBP22.01■■□□□ 1.11
CHKA-206ENST00000531341 C7P10643 843 aa22.01■■□□□ 1.11
CHKA-206ENST00000531341 CLDN6P56747 220 aa22.01■■□□□ 1.11
CHKA-206ENST00000531341 RPS14P62263 151 aaKnown RBP22.01■■□□□ 1.11
CHKA-206ENST00000531341 ARID5AQ03989 594 aa22.01■■□□□ 1.11
CHKA-206ENST00000531341 TRIP4Q15650 581 aaPredicted RBP22.01■■□□□ 1.11
CHKA-206ENST00000531341 FNDC3BQ53EP0 1204 aaKnown RBP22.01■■□□□ 1.11
CHKA-206ENST00000531341 RAB41Q5JT25 222 aa22.01■■□□□ 1.11
CHKA-206ENST00000531341 ADIPOR2Q86V24 386 aa22.01■■□□□ 1.11
CHKA-206ENST00000531341 PIGZQ86VD9 579 aa22.01■■□□□ 1.11
CHKA-206ENST00000531341 GALNT15Q8N3T1 639 aa22.01■■□□□ 1.11
CHKA-206ENST00000531341 NIF3L1Q9GZT8 377 aa22.01■■□□□ 1.11
CHKA-206ENST00000531341 PRSS16Q9NQE7 514 aa22.01■■□□□ 1.11
CHKA-206ENST00000531341 EXOC1Q9NV70 894 aa22.01■■□□□ 1.11
CHKA-206ENST00000531341 URB1O60287 2271 aaKnown RBP22.01■■□□□ 1.11
CHKA-206ENST00000531341 TMEM131Q92545 1883 aa22■■□□□ 1.11
CHKA-206ENST00000531341 KNL1Q8NG31 2342 aa22■■□□□ 1.11
CHKA-206ENST00000531341 TIMM44O43615 452 aa22■■□□□ 1.11
CHKA-206ENST00000531341 FSBPO95073 299 aa22■■□□□ 1.11
CHKA-206ENST00000531341 SEMA4FO95754 770 aa22■■□□□ 1.11
CHKA-206ENST00000531341 TRIM21P19474 475 aaKnown RBP22■■□□□ 1.11
CHKA-206ENST00000531341 GRK6P43250 576 aa22■■□□□ 1.11
CHKA-206ENST00000531341 SGSHP51688 502 aa22■■□□□ 1.11
CHKA-206ENST00000531341 PRAMEF14Q5SWL7 426 aa22■■□□□ 1.11
CHKA-206ENST00000531341 RSRC2Q7L4I2 434 aaKnown RBP22■■□□□ 1.11
CHKA-206ENST00000531341 SLC4A11Q8NBS3 891 aa22■■□□□ 1.11
CHKA-206ENST00000531341 SEMA4DQ92854 862 aa22■■□□□ 1.11
CHKA-206ENST00000531341 IGSF8Q969P0 613 aa22■■□□□ 1.11
CHKA-206ENST00000531341 MTG2Q9H4K7 406 aa22■■□□□ 1.11
CHKA-206ENST00000531341 OSGEPQ9NPF4 335 aa22■■□□□ 1.11
CHKA-206ENST00000531341 FAM13BQ9NYF5 915 aa22■■□□□ 1.11
CHKA-206ENST00000531341 STRIP2Q9ULQ0 834 aa22■■□□□ 1.11
CHKA-206ENST00000531341 FRMD4BQ9Y2L6 1034 aa22■■□□□ 1.11
CHKA-206ENST00000531341 PRB1P04280 392 aa21.99■■□□□ 1.11
CHKA-206ENST00000531341 SLFN14P0C7P3 912 aa21.99■■□□□ 1.11
CHKA-206ENST00000531341 CTSKP43235 329 aa21.99■■□□□ 1.11
CHKA-206ENST00000531341 GRIA4P48058 902 aa21.99■■□□□ 1.11
CHKA-206ENST00000531341 ME1P48163 572 aa21.99■■□□□ 1.11
CHKA-206ENST00000531341 TEAD4Q15561 434 aa21.99■■□□□ 1.11
CHKA-206ENST00000531341 MPPE1Q53F39 396 aa21.99■■□□□ 1.11
CHKA-206ENST00000531341 CHST9Q7L1S5 443 aa21.99■■□□□ 1.11
CHKA-206ENST00000531341 KIAA0907Q7Z7F0 614 aaPredicted RBP21.99■■□□□ 1.11
CHKA-206ENST00000531341 FMNL3Q8IVF7 1028 aa21.99■■□□□ 1.11
CHKA-206ENST00000531341 SCUBE3Q8IX30 993 aa21.99■■□□□ 1.11
CHKA-206ENST00000531341 CEP57L1Q8IYX8 460 aa21.99■■□□□ 1.11
CHKA-206ENST00000531341 PLD4Q96BZ4 506 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms