RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 AGO1Q9UL18 857 aaKnown RBP16.38■□□□□ 0.21
HDAC6-236ENST00000498808 PCDHA5Q9Y5H7 936 aa16.38■□□□□ 0.21
HDAC6-236ENST00000498808 ATMQ13315 3056 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 VILLO15195 856 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 CLSTN1O94985 981 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 CD2BP2O95400 341 aaKnown RBP16.37■□□□□ 0.21
HDAC6-236ENST00000498808 VNN1O95497 513 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 LDOC1O95751 146 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-236ENST00000498808 HMBSP08397 361 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 C1SP09871 688 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 CDK4P11802 303 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 KIF11P52732 1056 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 BCAT1P54687 386 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 BIRC3Q13489 604 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 NCOA4Q13772 614 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 ZNF276Q8N554 614 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 SAP25Q8TEE9 199 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 CYB5D2Q8WUJ1 264 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 TSC1Q92574 1164 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 FGF11Q92914 225 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 SLC6A18Q96N87 628 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 ACE2Q9BYF1 805 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-236ENST00000498808 SLC2A11Q9BYW1 496 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 RASAL2Q9UJF2 1139 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 SMC3Q9UQE7 1217 aa16.37■□□□□ 0.21
HDAC6-236ENST00000498808 ARID1BQ8NFD5 2236 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-236ENST00000498808 TIMM44O43615 452 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 BRINP1O60477 761 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 C4BPAP04003 597 aaKnown RBP16.36■□□□□ 0.21
HDAC6-236ENST00000498808 WNT1P04628 370 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 CYBBP04839 570 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 C21orf59P57076 290 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 RACK1P63244 317 aaKnown RBP16.36■□□□□ 0.21
HDAC6-236ENST00000498808 CXADRP78310 365 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 COG7P83436 770 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 ARID5AQ03989 594 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 CCDC173Q0VFZ6 552 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 CCDC186Q7Z3E2 898 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 DENND1CQ8IV53 801 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 SPACA3Q8IXA5 215 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 NELFCDQ8IXH7 590 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 CPXM2Q8N436 756 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 PDILTQ8N807 584 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 TMEM176AQ96HP8 235 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 TWNKQ96RR1 684 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 HNRNPABQ99729 332 aaKnown RBP16.36■□□□□ 0.21
HDAC6-236ENST00000498808 DCLK3Q9C098 648 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 SGK2Q9HBY8 427 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 PNPLA8Q9NP80 782 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 PRSS16Q9NQE7 514 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 CLIC5Q9NZA1 410 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 HECTD1Q9ULT8 2610 aa16.36■□□□□ 0.21
HDAC6-236ENST00000498808 CAPN8A6NHC0 703 aa16.35■□□□□ 0.21
HDAC6-236ENST00000498808 LRRIQ3A6PVS8 624 aaPredicted RBP16.35■□□□□ 0.21
HDAC6-236ENST00000498808 ERVH48-1M5A8F1 160 aa16.35■□□□□ 0.21
HDAC6-236ENST00000498808 DNTTP04053 509 aa16.35■□□□□ 0.21
HDAC6-236ENST00000498808 ITGAVP06756 1048 aa16.35■□□□□ 0.21
HDAC6-236ENST00000498808 RALAP11233 206 aa16.35■□□□□ 0.21
HDAC6-236ENST00000498808 HOXD9P28356 352 aaPredicted RBP16.35■□□□□ 0.21
HDAC6-236ENST00000498808 HLA-FP30511 346 aa16.35■□□□□ 0.21
HDAC6-236ENST00000498808 PSEN1P49768 467 aa16.35■□□□□ 0.21
HDAC6-236ENST00000498808 ZBTB16Q05516 673 aa16.35■□□□□ 0.21
HDAC6-236ENST00000498808 EFEMP1Q12805 493 aa16.35■□□□□ 0.21
HDAC6-236ENST00000498808 FNDC3BQ53EP0 1204 aaKnown RBP16.35■□□□□ 0.21
HDAC6-236ENST00000498808 FAM26FQ5R3K3 315 aa16.35■□□□□ 0.21
HDAC6-236ENST00000498808 KIAA0895LQ68EN5 471 aa16.35■□□□□ 0.21
HDAC6-236ENST00000498808 TADA2BQ86TJ2 420 aa16.35■□□□□ 0.21
HDAC6-236ENST00000498808 UNC93AQ86WB7 457 aa16.35■□□□□ 0.21
HDAC6-236ENST00000498808 ERICH1Q86X53 443 aa16.35■□□□□ 0.21
HDAC6-236ENST00000498808 FAM217AQ8IXS0 508 aa16.35■□□□□ 0.21
HDAC6-236ENST00000498808 EID2Q8N6I1 236 aa16.35■□□□□ 0.21
HDAC6-236ENST00000498808 DDI1Q8WTU0 396 aa16.35■□□□□ 0.21
HDAC6-236ENST00000498808 EBF2Q9HAK2 575 aa16.35■□□□□ 0.21
HDAC6-236ENST00000498808 USP3Q9Y6I4 520 aa16.35■□□□□ 0.21
HDAC6-236ENST00000498808 A0A1W2PPC4 97 aa16.34■□□□□ 0.21
HDAC6-236ENST00000498808 ABCB4P21439 1286 aa16.34■□□□□ 0.21
HDAC6-236ENST00000498808 ASPAP45381 313 aa16.34■□□□□ 0.21
HDAC6-236ENST00000498808 SNRPFP62306 86 aaKnown RBP16.34■□□□□ 0.21
HDAC6-236ENST00000498808 CLDN10P78369 228 aa16.34■□□□□ 0.21
HDAC6-236ENST00000498808 TBC1D25Q3MII6 688 aa16.34■□□□□ 0.21
HDAC6-236ENST00000498808 TAF1BQ53T94 588 aaPredicted RBP16.34■□□□□ 0.21
HDAC6-236ENST00000498808 FAM173BQ6P4H8 233 aa16.34■□□□□ 0.21
HDAC6-236ENST00000498808 C12orf56Q8IXR9 622 aa16.34■□□□□ 0.21
HDAC6-236ENST00000498808 ZC3H3Q8IXZ2 948 aaKnown RBP16.34■□□□□ 0.21
HDAC6-236ENST00000498808 PARD3BQ8TEW8 1205 aa16.34■□□□□ 0.21
HDAC6-236ENST00000498808 CYFIP2Q96F07 1278 aa16.34■□□□□ 0.21
HDAC6-236ENST00000498808 SEMA4CQ9C0C4 833 aa16.34■□□□□ 0.21
HDAC6-236ENST00000498808 TNMDQ9H2S6 317 aa16.34■□□□□ 0.21
HDAC6-236ENST00000498808 FBRSQ9HAH7 460 aa16.34■□□□□ 0.21
HDAC6-236ENST00000498808 UBE4BO95155 1302 aa16.34■□□□□ 0.21
HDAC6-236ENST00000498808 SPTA1P02549 2419 aa16.34■□□□□ 0.21
HDAC6-236ENST00000498808 PYCARD-AS1I3L0S3 204 aa16.33■□□□□ 0.2
HDAC6-236ENST00000498808 EPHA8P29322 1005 aaPredicted RBP16.33■□□□□ 0.2
HDAC6-236ENST00000498808 ACTN2P35609 894 aa16.33■□□□□ 0.2
HDAC6-236ENST00000498808 CEBPZQ03701 1054 aaKnown RBP16.33■□□□□ 0.2
HDAC6-236ENST00000498808 KCNH2Q12809 1159 aa16.33■□□□□ 0.2
HDAC6-236ENST00000498808 RABEP1Q15276 862 aa16.33■□□□□ 0.2
HDAC6-236ENST00000498808 TTC31Q49AM3 519 aaPredicted RBP16.33■□□□□ 0.2
HDAC6-236ENST00000498808 SPOPLQ6IQ16 392 aa16.33■□□□□ 0.2
HDAC6-236ENST00000498808 CHST9Q7L1S5 443 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms