RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 TLE3Q04726 772 aa6.1□□□□□ -1.43
SSR3-208ENST00000496050 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.1□□□□□ -1.43
SSR3-208ENST00000496050 C16orf89Q6UX73 402 aa6.1□□□□□ -1.43
SSR3-208ENST00000496050 MAATS1Q7Z4T9 603 aa6.1□□□□□ -1.43
SSR3-208ENST00000496050 PRRT2Q7Z6L0 340 aaPredicted RBP6.1□□□□□ -1.43
SSR3-208ENST00000496050 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.1□□□□□ -1.43
SSR3-208ENST00000496050 PTGR2Q8N8N7 351 aaPredicted RBP6.1□□□□□ -1.43
SSR3-208ENST00000496050 ACTRT2Q8TDY3 377 aa6.1□□□□□ -1.43
SSR3-208ENST00000496050 SNX18Q96RF0 628 aa6.1□□□□□ -1.43
SSR3-208ENST00000496050 REEP2Q9BRK0 252 aa6.1□□□□□ -1.43
SSR3-208ENST00000496050 JMJD4Q9H9V9 463 aa6.1□□□□□ -1.43
SSR3-208ENST00000496050 UBN1Q9NPG3 1134 aa6.1□□□□□ -1.43
SSR3-208ENST00000496050 VPS4AQ9UN37 437 aa6.1□□□□□ -1.43
SSR3-208ENST00000496050 DNAJC16Q9Y2G8 782 aa6.1□□□□□ -1.43
SSR3-208ENST00000496050 EPN1Q9Y6I3 576 aaPredicted RBP6.1□□□□□ -1.43
SSR3-208ENST00000496050 A6NLC8 198 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 STX16-NPEPL1H3BU86 382 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 GCOM1H8Y6P7 765 aaPredicted RBP6.09□□□□□ -1.43
SSR3-208ENST00000496050 STX16O14662 325 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 ZNF213O14771 459 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 KRT9P35527 623 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 CCT8P50990 548 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 CCR5P51681 352 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 JAK3P52333 1124 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 GPC5P78333 572 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 PSG6Q00889 435 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 CFHR3Q02985 330 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 LMAN2Q12907 356 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 FAM153CQ494X1 144 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 KIRREL2Q6UWL6 708 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 Q6YL49 198 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 RSRC2Q7L4I2 434 aaKnown RBP6.09□□□□□ -1.43
SSR3-208ENST00000496050 TSPYL6Q8N831 410 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 ANKRD44Q8N8A2 993 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 SRFBP1Q8NEF9 429 aaKnown RBP6.09□□□□□ -1.43
SSR3-208ENST00000496050 SLC2A12Q8TD20 617 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 HTRA1Q92743 480 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 THAP7Q9BT49 309 aaPredicted RBP6.09□□□□□ -1.43
SSR3-208ENST00000496050 PLEKHA2Q9HB19 425 aa6.09□□□□□ -1.43
SSR3-208ENST00000496050 AGAP5A6NIR3 686 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 C3orf70A6NLC5 250 aaPredicted RBP6.08□□□□□ -1.44
SSR3-208ENST00000496050 LINC00473A8K010 186 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 H0YIZ8 118 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 SLC3A2P08195 630 aaKnown RBP6.08□□□□□ -1.44
SSR3-208ENST00000496050 CYP21A2P08686 494 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 IFIT1P09914 478 aaKnown RBP6.08□□□□□ -1.44
SSR3-208ENST00000496050 CPA1P15085 419 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 CHN1P15882 459 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 TNFAIP3P21580 790 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 PCSK6P29122 969 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 CXCR5P32302 372 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 GALNSP34059 522 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 ADRA1BP35368 520 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 TUBP50607 506 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 COPB1P53618 953 aaKnown RBP6.08□□□□□ -1.44
SSR3-208ENST00000496050 RCAN1P53805 252 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 LMOD3Q0VAK6 560 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 GPR162Q16538 588 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 ERCC6LQ2NKX8 1250 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 ZNF484Q5JVG2 852 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 WDR78Q5VTH9 848 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 ATG16L1Q676U5 607 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 TMEM88Q6PEY1 159 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 SYNE3Q6ZMZ3 975 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 ZNF804AQ7Z570 1209 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 VRK3Q8IV63 474 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 TBC1D5Q92609 795 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 EDC3Q96F86 508 aaKnown RBP6.08□□□□□ -1.44
SSR3-208ENST00000496050 TRMT61AQ96FX7 289 aaKnown RBP6.08□□□□□ -1.44
SSR3-208ENST00000496050 PPP1R10Q96QC0 940 aaKnown RBP6.08□□□□□ -1.44
SSR3-208ENST00000496050 NPAS1Q99742 590 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 GPR63Q9BZJ6 419 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 CDCP1Q9H5V8 836 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 RMI1Q9H9A7 625 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 PDE11AQ9HCR9 933 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 ABHD10Q9NUJ1 306 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 FZD4Q9ULV1 537 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 ST3GAL5Q9UNP4 418 aa6.08□□□□□ -1.44
SSR3-208ENST00000496050 CYP3A7-CYP3A51PA0A087WV96 503 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 VWA3AA6NCI4 1184 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 ANP32CO43423 234 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 PRAMEF2O60811 474 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 HEXIM1O94992 359 aaKnown RBP6.07□□□□□ -1.44
SSR3-208ENST00000496050 MBD4O95243 580 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 PDE8BO95263 885 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 ADH4P08319 380 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 CYP3A7P24462 503 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 FOXL2P58012 376 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 FAM3BP58499 235 aaPredicted RBP6.07□□□□□ -1.44
SSR3-208ENST00000496050 MPP1Q00013 466 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 FOXI1Q12951 378 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 ZNF169Q14929 603 aaPredicted RBP6.07□□□□□ -1.44
SSR3-208ENST00000496050 WDR45BQ5MNZ6 344 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 CBWD5Q5RIA9 395 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 FAAH2Q6GMR7 532 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 ANO7Q6IWH7 933 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 GRASPQ7Z6J2 395 aaPredicted RBP6.07□□□□□ -1.44
SSR3-208ENST00000496050 ARRDC3Q96B67 414 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 RBM17Q96I25 401 aaKnown RBP6.07□□□□□ -1.44
SSR3-208ENST00000496050 PDLIM2Q96JY6 352 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms