RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 NTRK1P04629 796 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 FAM200BP0CF97 657 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 RALAP11233 206 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 RARGP13631 454 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 P4HA1P13674 534 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 CKMT2P17540 419 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 EPHA8P29322 1005 aaPredicted RBP8.03□□□□□ -1.12
PDPN-205ENST00000487038 CSRP3P50461 194 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 CASP5P51878 434 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 MAP3K7CLP57077 242 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 COG7P83436 770 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 PDE4CQ08493 712 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 SNRNP35Q16560 246 aaKnown RBP8.03□□□□□ -1.12
PDPN-205ENST00000487038 ZNF699Q32M78 642 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 ZNF667Q5HYK9 610 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 C10orf120Q5SQS8 335 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 KIAA0895LQ68EN5 471 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 PRICKLE2Q7Z3G6 844 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 CBWD2Q8IUF1 395 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 DHX40Q8IX18 779 aaKnown RBP8.03□□□□□ -1.12
PDPN-205ENST00000487038 CPXM2Q8N436 756 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 SAP25Q8TEE9 199 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 WFIKKN2Q8TEU8 576 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 DDI1Q8WTU0 396 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 KCNE4Q8WWG9 221 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 RFFLQ8WZ73 363 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 MED8Q96G25 268 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 PIWIL1Q96J94 861 aaKnown RBP8.03□□□□□ -1.12
PDPN-205ENST00000487038 DPH1Q9BZG8 443 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 CSNK1G1Q9HCP0 422 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 PNPLA8Q9NP80 782 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 AASDHPPTQ9NRN7 309 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.03□□□□□ -1.12
PDPN-205ENST00000487038 HSPBP1Q9NZL4 362 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 RASAL2Q9UJF2 1139 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 TPX2Q9ULW0 747 aaKnown RBP8.03□□□□□ -1.12
PDPN-205ENST00000487038 SCML2Q9UQR0 700 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 HEMK1Q9Y5R4 338 aaPredicted RBP8.03□□□□□ -1.12
PDPN-205ENST00000487038 SLCO1B1Q9Y6L6 691 aa8.03□□□□□ -1.12
PDPN-205ENST00000487038 SPTBN1Q01082 2364 aaKnown RBP8.03□□□□□ -1.12
PDPN-205ENST00000487038 FAM47DPA6NHR8 397 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 LRRC72A6NJI9 287 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 CBX4O00257 560 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 MAGEC1O60732 1142 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 RNASEH1O60930 286 aaKnown RBP8.02□□□□□ -1.13
PDPN-205ENST00000487038 PHACTR2O75167 634 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 CST3P01034 146 aaPredicted RBP8.02□□□□□ -1.13
PDPN-205ENST00000487038 C7P10643 843 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 ACP1P24666 158 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 CD38P28907 300 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 CORO1AP31146 461 aaKnown RBP8.02□□□□□ -1.13
PDPN-205ENST00000487038 ZNF445P59923 1031 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 ERVPABLB-1P60509 514 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 E2F1Q01094 437 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 VAC14Q08AM6 782 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 LY6DQ14210 128 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 ZNF776Q68DI1 518 aaPredicted RBP8.02□□□□□ -1.13
PDPN-205ENST00000487038 KDM7AQ6ZMT4 941 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 PAQR9Q6ZVX9 377 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 USP30Q70CQ3 517 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 LURAP1LQ8IV03 231 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 CCDC65Q8IXS2 484 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 FUKQ8N0W3 1084 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 AHI1Q8N157 1196 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 DCBLD1Q8N8Z6 715 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 SLC2A14Q8TDB8 520 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 GANCQ8TET4 914 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 TSC1Q92574 1164 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 DNAJC19Q96DA6 116 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 NAF1Q96HR8 494 aaKnown RBP8.02□□□□□ -1.13
PDPN-205ENST00000487038 SLC6A18Q96N87 628 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 SMOQ99835 787 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 FAM117AQ9C073 453 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 DNAI2Q9GZS0 605 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 VRTNQ9H8Y1 702 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 CPNE5Q9HCH3 593 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 PANK4Q9NVE7 773 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 NAGPAQ9UK23 515 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 ANKRD17O75179 2603 aaKnown RBP8.02□□□□□ -1.13
PDPN-205ENST00000487038 NBASA2RRP1 2371 aa8.02□□□□□ -1.13
PDPN-205ENST00000487038 AHCTF1Q8WYP5 2266 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 A0A1W2PQH9 124 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 FRMD3A2A2Y4 597 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 PYCARD-AS1I3L0S3 204 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 MDM4O15151 490 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 EIF3DO15371 548 aaKnown RBP eCLIP8.01□□□□□ -1.13
PDPN-205ENST00000487038 KLK10O43240 276 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 STX6O43752 255 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 IGHV4-34P06331 123 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 ATP5BP06576 529 aaKnown RBP8.01□□□□□ -1.13
PDPN-205ENST00000487038 CCDC130P13994 396 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 AP3M2P53677 418 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 MYL6P60660 151 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 RPS14P62263 151 aaKnown RBP8.01□□□□□ -1.13
PDPN-205ENST00000487038 GABREP78334 506 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 DAB2P98082 770 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 INSM1Q01101 510 aaPredicted RBP8.01□□□□□ -1.13
PDPN-205ENST00000487038 BIRC3Q13489 604 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 PSMD6Q15008 389 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 MPPE1Q53F39 396 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms