RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 SLC7A5Q01650 507 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 ARID5AQ03989 594 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 HLTFQ14527 1009 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL5A1-202ENST00000371820 PDGFRLQ15198 375 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 CCDC142Q17RM4 750 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 ITPRIPL2Q3MIP1 535 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 TTC31Q49AM3 519 aaPredicted RBP10.85□□□□□ -0.67
COL5A1-202ENST00000371820 KRT39Q6A163 491 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 TXNDC8Q6A555 127 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 SCARA5Q6ZMJ2 495 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 CEP128Q6ZU80 1094 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 TMEM150AQ86TG1 271 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 HOOK3Q86VS8 718 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 C10orf67Q8IYJ2 551 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 NUP93Q8N1F7 819 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 LRRC57Q8N9N7 239 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 SLC30A5Q8TAD4 765 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 SEC14L1Q92503 715 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 CENPTQ96BT3 561 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 RSPRY1Q96DX4 576 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 HES6Q96HZ4 224 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 FAM124BQ9H5Z6 455 aaPredicted RBP10.85□□□□□ -0.67
COL5A1-202ENST00000371820 TMBIM4Q9HC24 238 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 DMAP1Q9NPF5 467 aaPredicted RBP10.85□□□□□ -0.67
COL5A1-202ENST00000371820 COMMD8Q9NX08 183 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 GCNT4Q9P109 453 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 SALL4Q9UJQ4 1053 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 NFU1Q9UMS0 254 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 NENFQ9UMX5 172 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 DENND4CQ5VZ89 1909 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 PTPRDP23468 1912 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 SPECC1L-ADORA2AF8WAN1 911 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 NDUFAB1O14561 156 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 FTCDO95954 541 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 GLI1P08151 1106 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 TRIM49P0CI25 452 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 TRIM49CP0CI26 452 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 TCF3P15923 654 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 HDCP19113 662 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 NR1D1P20393 614 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 CTHP32929 405 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 MDH1P40925 334 aaKnown RBP10.84□□□□□ -0.67
COL5A1-202ENST00000371820 RAP1GAPP47736 663 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 IFNAR2P48551 515 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 CARSP49589 748 aaKnown RBP10.84□□□□□ -0.67
COL5A1-202ENST00000371820 MXI1P50539 228 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 CDH8P55286 799 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 RUNX3Q13761 415 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 RSPO4Q2I0M5 234 aaPredicted RBP10.84□□□□□ -0.67
COL5A1-202ENST00000371820 DCAF17Q5H9S7 520 aaPredicted RBP10.84□□□□□ -0.67
COL5A1-202ENST00000371820 WDR44Q5JSH3 913 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 DGKKQ5KSL6 1271 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 DPY19L2P1Q6NXN4 242 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 DAAM2Q86T65 1068 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 FAM35AQ86V20 835 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 DDX42Q86XP3 938 aaKnown RBP eCLIP10.84□□□□□ -0.67
COL5A1-202ENST00000371820 CPA6Q8N4T0 437 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 KIAA1958Q8N8K9 716 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 STKLD1Q8NE28 680 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 OVCA2Q8WZ82 227 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 USP13Q92995 863 aaPredicted RBP10.84□□□□□ -0.67
COL5A1-202ENST00000371820 NT5C1AQ9BXI3 368 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 B3GNT5Q9BYG0 378 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 ZNF518BQ9C0D4 1074 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 NIF3L1Q9GZT8 377 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 DPEP3Q9H4B8 488 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 GKN1Q9NS71 199 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 APEX2Q9UBZ4 518 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 DNAJC12Q9UKB3 198 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 NME7Q9Y5B8 376 aa10.84□□□□□ -0.67
COL5A1-202ENST00000371820 KIF26AQ9ULI4 1882 aaPredicted RBP10.83□□□□□ -0.68
COL5A1-202ENST00000371820 RAD51CO43502 376 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 RTN2O75298 545 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 CHRNB1P11230 501 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 YWHAQP27348 245 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 CHRNA3P32297 505 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 ASPAP45381 313 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 CCR3P51677 355 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 NDST1P52848 882 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 GALCP54803 685 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 PPP3CAQ08209 521 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 INCA1Q0VD86 236 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 USP4Q13107 963 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 NR1H3Q13133 447 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 SLMAPQ14BN4 828 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 ODF2Q5BJF6 829 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 C1orf220Q5T0J3 134 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 C11orf63Q6NUN7 778 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 TADA2BQ86TJ2 420 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 ACOT1Q86TX2 421 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 NT5DC3Q86UY8 548 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 GPIHBP1Q8IV16 184 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 CRYBG2Q8N1P7 616 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 SYNPOQ8N3V7 929 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 OTUD6BQ8N6M0 293 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 FBXL13Q8NEE6 735 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 CASKIN2Q8WXE0 1202 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 FBXO32Q969P5 355 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 MS4A14Q96JA4 679 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 ZFYVE19Q96K21 471 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms