RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 SNX25Q9H3E2 840 aa11.61□□□□□ -0.55
PTP4A1-207ENST00000639568 FBXO10Q9UK96 956 aa11.61□□□□□ -0.55
PTP4A1-207ENST00000639568 DOPEY1Q5JWR5 2465 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 TIMM44O43615 452 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 OPA1O60313 960 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 TLR5O60602 858 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 FAM13AO94988 1023 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 REC8O95072 547 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 GJB6O95452 261 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 ITGB2P05107 769 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 IGHV4-34P06331 123 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 FAM87AP0C7U9 286 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 RIPPLY3P57055 190 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 CAMK2GQ13555 558 aaPredicted RBP11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 EIF4HQ15056 248 aaKnown RBP11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 POSTNQ15063 836 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 PROX2Q3B8N5 592 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 C3orf38Q5JPI3 329 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 SFMBT2Q5VUG0 894 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 ANKS1BQ7Z6G8 1248 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 FAM26EQ8N5C1 309 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 KBTBD7Q8WVZ9 684 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 EXTL1Q92935 676 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 LIN37Q96GY3 246 aaPredicted RBP11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 CDK5RAP3Q96JB5 506 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 ORAI3Q9BRQ5 295 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 FAM213AQ9BRX8 229 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 GZF1Q9H116 711 aaPredicted RBP11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 ZHX3Q9H4I2 956 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 ODF2LQ9ULJ1 636 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 PLA2G4CQ9UP65 541 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 SCN1AP35498 2009 aa11.6□□□□□ -0.55
PTP4A1-207ENST00000639568 MYOFQ9NZM1 2061 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 ANAPC1Q9H1A4 1944 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 BLACEA4D250 179 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 TISP43B9A030 160 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 TLR4O00206 839 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 SIGLEC6O43699 453 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 GREM1O60565 184 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 PPFIA2O75334 1257 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 WNT1P04628 370 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 TMEM191BP0C7N4 346 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 PLA2G4BP0C869 781 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 ITGB6P18564 788 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 WARSP23381 471 aaKnown RBP11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 ATP5C1P36542 298 aaKnown RBP11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 GNL1P36915 607 aaPredicted RBP11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 RXRGP48443 463 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 CACNA2D1P54289 1103 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 SLC12A3P55017 1021 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 ZNF211Q13398 564 aaPredicted RBP11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 GNL2Q13823 731 aaKnown RBP11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 FNDC3BQ53EP0 1204 aaKnown RBP11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 CDCP2Q5VXM1 449 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 CRELD2Q6UXH1 353 aaPredicted RBP11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 KCTD17Q8N5Z5 321 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 SCAMP5Q8TAC9 235 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 SORCS1Q8WY21 1168 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 GOLGA1Q92805 767 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 HPS3Q969F9 1004 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 HPDLQ96IR7 371 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 SLC46A1Q96NT5 459 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 PLIN2Q99541 437 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 SEMA3CQ99985 751 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 KLF16Q9BXK1 252 aaPredicted RBP11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 TM6SF1Q9BZW5 370 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 ZNF518BQ9C0D4 1074 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 OSBPL2Q9H1P3 480 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 ERVMER34-1Q9H9K5 563 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 FBRSQ9HAH7 460 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 PARVGQ9HBI0 331 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 HSPBP1Q9NZL4 362 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 NOL7Q9UMY1 257 aaKnown RBP11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 SATB2Q9UPW6 733 aa11.59□□□□□ -0.55
PTP4A1-207ENST00000639568 LRRC72A6NJI9 287 aa11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 CYP26A1O43174 497 aa11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 TBX18O95935 607 aa11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 KRT18P05783 430 aaKnown RBP11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 PTPN1P18031 435 aaKnown RBP11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 SLC5A3P53794 718 aa11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 NXPH1P58417 271 aa11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 RPS14P62263 151 aaKnown RBP11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 GTF2BQ00403 316 aa11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 SFSWAPQ12872 951 aaKnown RBP11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 FOXR1Q6PIV2 292 aa11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 IGF2-ASQ6U949 168 aa11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 DTHD1Q6ZMT9 781 aa11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 ARL14Q8N4G2 192 aa11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 C4orf32Q8N8J7 132 aa11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 OR6B3Q8NGW1 331 aa11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 SGF29Q96ES7 293 aa11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 SERAC1Q96JX3 654 aa11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 REEP2Q9BRK0 252 aa11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 TLR8Q9NR97 1041 aaKnown RBP11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 RBAKQ9NYW8 714 aaPredicted RBP11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 STYXL1Q9Y6J8 313 aa11.58□□□□□ -0.56
PTP4A1-207ENST00000639568 TLN1Q9Y490 2541 aaKnown RBP11.57□□□□□ -0.56
PTP4A1-207ENST00000639568 NBPF19A0A087WUL8 3843 aa11.57□□□□□ -0.56
PTP4A1-207ENST00000639568 CLDN5O00501 218 aa11.57□□□□□ -0.56
PTP4A1-207ENST00000639568 SDC3O75056 442 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms