RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 SEL1L3Q68CR1 1132 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 ZNF410Q86VK4 478 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 FAM71AQ8IYT1 594 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 OR5B17Q8NGF7 314 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 SPATA20Q8TB22 786 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 FAM81AQ8TBF8 368 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 SHC3Q92529 594 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 SEPT8Q92599 483 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 OTULINQ96BN8 352 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 TRIM45Q9H8W5 580 aaPredicted RBP12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 TMEM161AQ9NX61 479 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 GPRC5DQ9NZD1 345 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 MROH7Q68CQ1 1323 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 ITGA9Q13797 1035 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 KCTD19Q17RG1 926 aaPredicted RBP12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 CELF3Q5SZQ8 465 aaKnown RBP12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 PKN3Q6P5Z2 889 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 MOB2Q70IA6 237 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 OR9Q1Q8NGQ5 310 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 INPP5DQ92835 1189 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 CNDP1Q96KN2 507 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 TMEM120AQ9BXJ8 343 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 TMEM134Q9H6X4 195 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 APOC4-APOC2K7ER74 178 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 AHCYL1O43865 530 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 APOC2P02655 101 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 NFICP08651 508 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 UBTFL6P0CB48 400 aaPredicted RBP12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 MGAT1P26572 445 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 CAPSQ13938 189 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 RASA2Q15283 850 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 TMEM154Q6P9G4 183 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 EFL1Q7Z2Z2 1120 aaKnown RBP12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 SLC9A9Q8IVB4 645 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 ECSITQ9BQ95 431 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 THUMPD3Q9BV44 507 aaKnown RBP12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 SMPD4Q9NXE4 827 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 PNMA8BQ9ULN7 279 aaPredicted RBP12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 PRR23AA6NEV1 266 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 RNF103O00237 685 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 URODP06132 367 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 TNFSF9P41273 254 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 GJA8P48165 433 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 UGCGQ16739 394 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 TATDN1Q6P1N9 297 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 OLFML1Q6UWY5 402 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 PARVBQ9HBI1 364 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 NCKIPSDQ9NZQ3 722 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 DDX20Q9UHI6 824 aaKnown RBP12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 WDR27A2RRH5 827 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 ERI2A8K979 691 aaKnown RBP12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 EVPLLA8MZ36 301 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 HOXA2O43364 376 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 KPNA6O60684 536 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 PPP1R11O60927 126 aaPredicted RBP12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 YBX3P16989 372 aaKnown RBP eCLIP12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 BDNFP23560 247 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 RHOAP61586 193 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 MAMLD1Q13495 774 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 FSCN1Q16658 493 aaKnown RBP12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 FAM171A1Q5VUB5 890 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 TRIM74Q86UV6 250 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 TRIM73Q86UV7 250 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 ZDHHC17Q8IUH5 632 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 C17orf80Q9BSJ5 609 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 ULBP1Q9BZM6 244 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 EFCAB1Q9HAE3 211 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 XPNPEP3Q9NQH7 507 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 AAASQ9NRG9 546 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 RHBDL2Q9NX52 303 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 SPASTQ9UBP0 616 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 DRG1Q9Y295 367 aaKnown RBP12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 NFASCO94856 1347 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 FER1L4A9Z1Z3 1794 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 GOLGA8TH3BQL2 631 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 TM9SF1O15321 606 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 GJB1P08034 283 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 THRAP10827 490 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 GRK2P25098 689 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 CNTFP26441 200 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 TUBP50607 506 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 ITGB3BPQ13352 177 aaPredicted RBP12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 DMC1Q14565 340 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 N4BP2L1Q5TBK1 243 aaPredicted RBP12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 DAB2IPQ5VWQ8 1189 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 KATNAL2Q8IYT4 538 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 USP13Q92995 863 aaPredicted RBP12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 CCDC126Q96EE4 140 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 SENP8Q96LD8 212 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 FGFBP2Q9BYJ0 223 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 RRAGCQ9HB90 399 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 TRIM16O95361 564 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 RPLP2P05387 115 aaKnown RBP12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 KDELR1P24390 212 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 GP5P40197 560 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 FMO1Q01740 532 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 CDH17Q12864 832 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 ZACNQ401N2 412 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 FUT11Q495W5 492 aa12.84□□□□□ -0.35
TNFAIP3-206ENST00000612899 PRAMEF19Q5SWL8 479 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms