RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 METTL5Q9NRN9 209 aaKnown RBP20.24■□□□□ 0.83
DDX55-207ENST00000540763 STOML2Q9UJZ1 356 aa20.24■□□□□ 0.83
DDX55-207ENST00000540763 NENFQ9UMX5 172 aa20.24■□□□□ 0.83
DDX55-207ENST00000540763 MYOFQ9NZM1 2061 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 KRBA1A5PL33 1030 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 TMEM221A6NGB7 291 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 SIGLEC16A6NMB1 481 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 M0R296 226 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 ADH1CP00326 375 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 FTLP02792 175 aaPredicted RBP20.23■□□□□ 0.83
DDX55-207ENST00000540763 KLKB1P03952 638 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 SLC2A3P11169 496 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 ARSAP15289 507 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 CHKAP35790 457 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 FLT3P36888 993 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 NHLH1Q02575 133 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 TNK2Q07912 1038 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 SLC18A3Q16572 532 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 ASTE1Q2TB18 679 aaPredicted RBP20.23■□□□□ 0.83
DDX55-207ENST00000540763 SLC25A52Q3SY17 297 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 TRIM68Q6AZZ1 485 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 CPXM2Q8N436 756 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 FCRL2Q96LA5 508 aaPredicted RBP20.23■□□□□ 0.83
DDX55-207ENST00000540763 LINC00597Q9H2U6 94 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 FAM204AQ9H8W3 233 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 HEBP1Q9NRV9 189 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 GTSE1Q9NYZ3 720 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 CA14Q9ULX7 337 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 PIAS3Q9Y6X2 628 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 TRIOO75962 3097 aa20.23■□□□□ 0.83
DDX55-207ENST00000540763 A0A087X0T9 212 aa20.22■□□□□ 0.83
DDX55-207ENST00000540763 MAN2B1O00754 1011 aa20.22■□□□□ 0.83
DDX55-207ENST00000540763 F9P00740 461 aa20.22■□□□□ 0.83
DDX55-207ENST00000540763 CYP17A1P05093 508 aa20.22■□□□□ 0.83
DDX55-207ENST00000540763 HMBSP08397 361 aa20.22■□□□□ 0.83
DDX55-207ENST00000540763 FAM228BP0C875 321 aa20.22■□□□□ 0.83
DDX55-207ENST00000540763 KRT3P12035 628 aa20.22■□□□□ 0.83
DDX55-207ENST00000540763 CTHP32929 405 aa20.22■□□□□ 0.83
DDX55-207ENST00000540763 EIF4A3P38919 411 aaKnown RBP20.22■□□□□ 0.83
DDX55-207ENST00000540763 PPP1R15BQ5SWA1 713 aa20.22■□□□□ 0.83
DDX55-207ENST00000540763 PLEKHA7Q6IQ23 1121 aa20.22■□□□□ 0.83
DDX55-207ENST00000540763 DNAJC24Q6P3W2 148 aa20.22■□□□□ 0.83
DDX55-207ENST00000540763 BNIPLQ7Z465 357 aa20.22■□□□□ 0.83
DDX55-207ENST00000540763 SIX5Q8N196 739 aa20.22■□□□□ 0.83
DDX55-207ENST00000540763 PANX2Q96RD6 677 aa20.22■□□□□ 0.83
DDX55-207ENST00000540763 DEF6Q9H4E7 631 aa20.22■□□□□ 0.83
DDX55-207ENST00000540763 PARVAQ9NVD7 372 aa20.22■□□□□ 0.83
DDX55-207ENST00000540763 DDIT4Q9NX09 232 aa20.22■□□□□ 0.83
DDX55-207ENST00000540763 AGO1Q9UL18 857 aaKnown RBP20.22■□□□□ 0.83
DDX55-207ENST00000540763 PAXBP1Q9Y5B6 917 aa20.22■□□□□ 0.83
DDX55-207ENST00000540763 C2CD4BA6NLJ0 364 aa20.21■□□□□ 0.83
DDX55-207ENST00000540763 TMCO5BA8MYB1 307 aa20.21■□□□□ 0.83
DDX55-207ENST00000540763 APOEP02649 317 aa20.21■□□□□ 0.83
DDX55-207ENST00000540763 FECHP22830 423 aa20.21■□□□□ 0.83
DDX55-207ENST00000540763 RRM1P23921 792 aa20.21■□□□□ 0.83
DDX55-207ENST00000540763 PTPN9P43378 593 aa20.21■□□□□ 0.83
DDX55-207ENST00000540763 MRE11P49959 708 aa20.21■□□□□ 0.83
DDX55-207ENST00000540763 RNASE9P60153 205 aaKnown RBP20.21■□□□□ 0.83
DDX55-207ENST00000540763 PPP2R5DQ14738 602 aa20.21■□□□□ 0.83
DDX55-207ENST00000540763 DHCR24Q15392 516 aa20.21■□□□□ 0.83
DDX55-207ENST00000540763 OTUD1Q5VV17 481 aaPredicted RBP20.21■□□□□ 0.83
DDX55-207ENST00000540763 ALKBH5Q6P6C2 394 aaKnown RBP20.21■□□□□ 0.83
DDX55-207ENST00000540763 TPRG1Q6ZUI0 275 aa20.21■□□□□ 0.83
DDX55-207ENST00000540763 EXOC4Q96A65 974 aa20.21■□□□□ 0.83
DDX55-207ENST00000540763 SPHK2Q9NRA0 654 aa20.21■□□□□ 0.83
DDX55-207ENST00000540763 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.21■□□□□ 0.83
DDX55-207ENST00000540763 MARK1Q9P0L2 795 aa20.21■□□□□ 0.83
DDX55-207ENST00000540763 SCINQ9Y6U3 715 aa20.21■□□□□ 0.83
DDX55-207ENST00000540763 ZDBF2Q9HCK1 2354 aa20.21■□□□□ 0.83
DDX55-207ENST00000540763 FAM170AA1A519 330 aa20.2■□□□□ 0.82
DDX55-207ENST00000540763 ANKRD62A6NC57 917 aa20.2■□□□□ 0.82
DDX55-207ENST00000540763 OTOL1A6NHN0 477 aaPredicted RBP20.2■□□□□ 0.82
DDX55-207ENST00000540763 GOLGA6L6A8MZA4 724 aa20.2■□□□□ 0.82
DDX55-207ENST00000540763 SPECC1L-ADORA2AF8WAN1 911 aa20.2■□□□□ 0.82
DDX55-207ENST00000540763 M0QYT0 321 aa20.2■□□□□ 0.82
DDX55-207ENST00000540763 HOXC11O43248 304 aaPredicted RBP20.2■□□□□ 0.82
DDX55-207ENST00000540763 SDC4P31431 198 aa20.2■□□□□ 0.82
DDX55-207ENST00000540763 CCR1P32246 355 aa20.2■□□□□ 0.82
DDX55-207ENST00000540763 GJA4P35212 333 aa20.2■□□□□ 0.82
DDX55-207ENST00000540763 EIF2DP41214 584 aaKnown RBP20.2■□□□□ 0.82
DDX55-207ENST00000540763 SLC11A2P49281 568 aa20.2■□□□□ 0.82
DDX55-207ENST00000540763 SULT1E1P49888 294 aa20.2■□□□□ 0.82
DDX55-207ENST00000540763 PITX1P78337 314 aaPredicted RBP20.2■□□□□ 0.82
DDX55-207ENST00000540763 GAD2Q05329 585 aa20.2■□□□□ 0.82
DDX55-207ENST00000540763 BRMS1LQ5PSV4 323 aa20.2■□□□□ 0.82
DDX55-207ENST00000540763 TRNP1Q6NT89 227 aa20.2■□□□□ 0.82
DDX55-207ENST00000540763 ZNF852Q6ZMS4 543 aa20.2■□□□□ 0.82
DDX55-207ENST00000540763 DENND1CQ8IV53 801 aa20.2■□□□□ 0.82
DDX55-207ENST00000540763 ADAM32Q8TC27 787 aa20.2■□□□□ 0.82
DDX55-207ENST00000540763 BTN2A3PQ96KV6 586 aa20.2■□□□□ 0.82
DDX55-207ENST00000540763 CCDC42Q96M95 316 aa20.2■□□□□ 0.82
DDX55-207ENST00000540763 OSBPL6Q9BZF3 934 aa20.2■□□□□ 0.82
DDX55-207ENST00000540763 NHEJ1Q9H9Q4 299 aaPredicted RBP20.2■□□□□ 0.82
DDX55-207ENST00000540763 MRPS17Q9Y2R5 130 aaKnown RBP20.2■□□□□ 0.82
DDX55-207ENST00000540763 GOLGA6L3A6NEY3 463 aa20.19■□□□□ 0.82
DDX55-207ENST00000540763 SCAMP3O14828 347 aaKnown RBP20.19■□□□□ 0.82
DDX55-207ENST00000540763 AKR1B10O60218 316 aa20.19■□□□□ 0.82
DDX55-207ENST00000540763 ENDOD1O94919 500 aa20.19■□□□□ 0.82
DDX55-207ENST00000540763 ADH5P11766 374 aa20.19■□□□□ 0.82
DDX55-207ENST00000540763 PDGFRAP16234 1089 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms