RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 ZNF667Q5HYK9 610 aa13.07□□□□□ -0.32
CAPN1-223ENST00000533079 SERPINA13PQ6UXR4 307 aa13.07□□□□□ -0.32
CAPN1-223ENST00000533079 MARCH9Q86YJ5 346 aa13.07□□□□□ -0.32
CAPN1-223ENST00000533079 XXYLT1Q8NBI6 393 aa13.07□□□□□ -0.32
CAPN1-223ENST00000533079 ZMIZ2Q8NF64 920 aa13.07□□□□□ -0.32
CAPN1-223ENST00000533079 OR2T3Q8NH03 318 aa13.07□□□□□ -0.32
CAPN1-223ENST00000533079 BHMTQ93088 406 aa13.07□□□□□ -0.32
CAPN1-223ENST00000533079 SMOQ99835 787 aa13.07□□□□□ -0.32
CAPN1-223ENST00000533079 DCLK3Q9C098 648 aa13.07□□□□□ -0.32
CAPN1-223ENST00000533079 NRSN2Q9GZP1 204 aa13.07□□□□□ -0.32
CAPN1-223ENST00000533079 LHX5Q9H2C1 402 aa13.07□□□□□ -0.32
CAPN1-223ENST00000533079 SMYD3Q9H7B4 428 aa13.07□□□□□ -0.32
CAPN1-223ENST00000533079 AGPAT3Q9NRZ7 376 aa13.07□□□□□ -0.32
CAPN1-223ENST00000533079 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.07□□□□□ -0.32
CAPN1-223ENST00000533079 ELOVL2Q9NXB9 296 aa13.07□□□□□ -0.32
CAPN1-223ENST00000533079 PLK2Q9NYY3 685 aa13.07□□□□□ -0.32
CAPN1-223ENST00000533079 MORC2Q9Y6X9 1032 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-223ENST00000533079 GOLGA6L22H0YM25 854 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 YKT6O15498 198 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 CYP26A1O43174 497 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 TIMM44O43615 452 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 PHACTR2O75167 634 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 RFPL3O75679 317 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 STC2O76061 302 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 TBX18O95935 607 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 EPHX1P07099 455 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 FAM200BP0CF97 657 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 PRKCHP24723 683 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 CD27P26842 260 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 CTSKP43235 329 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 PGFP49763 221 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 MAP3K7CLP57077 242 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 ARID5AQ03989 594 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 CAMK2GQ13555 558 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-223ENST00000533079 RTP5Q14D33 572 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 SKOR2Q2VWA4 1001 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-223ENST00000533079 UNC93AQ86WB7 457 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 ZNF843Q8N446 348 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 SLC2A14Q8TDB8 520 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 CCDC127Q96BQ5 260 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 PIWIL1Q96J94 861 aaKnown RBP13.06□□□□□ -0.32
CAPN1-223ENST00000533079 BTBD1Q9H0C5 482 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 TNMDQ9H2S6 317 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 OSER1Q9NX31 292 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 CGNQ9P2M7 1197 aaKnown RBP13.06□□□□□ -0.32
CAPN1-223ENST00000533079 TMEM131Q92545 1883 aa13.06□□□□□ -0.32
CAPN1-223ENST00000533079 GON4LQ3T8J9 2241 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 STX6O43752 255 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 TSPAN3O60637 253 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 BEST1O76090 585 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 CLSTN1O94985 981 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 SEMA4FO95754 770 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 RARGP13631 454 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 CCDC130P13994 396 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 JUPP14923 745 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 SYT1P21579 422 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 ITPKBP27987 946 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 BCAT1P54687 386 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 COG7P83436 770 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 TTC31Q49AM3 519 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-223ENST00000533079 C10orf120Q5SQS8 335 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 LARP1BQ659C4 914 aaKnown RBP13.05□□□□□ -0.32
CAPN1-223ENST00000533079 EPM2AIP1Q7L775 607 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-223ENST00000533079 CCDC186Q7Z3E2 898 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 GPR155Q7Z3F1 870 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 ADAT2Q7Z6V5 191 aaKnown RBP13.05□□□□□ -0.32
CAPN1-223ENST00000533079 ACOT1Q86TX2 421 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 CACUL1Q86Y37 369 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 CRYBG2Q8N1P7 616 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 CPXM2Q8N436 756 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 RDH13Q8NBN7 331 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 RBBP8NLQ8NC74 664 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-223ENST00000533079 ZNF507Q8TCN5 953 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 SKA1Q96BD8 255 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 ACE2Q9BYF1 805 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-223ENST00000533079 CIPCQ9C0C6 399 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 C6orf106Q9H6K1 298 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-223ENST00000533079 SGK2Q9HBY8 427 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 CLIC5Q9NZA1 410 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 ATP6V1DQ9Y5K8 247 aa13.05□□□□□ -0.32
CAPN1-223ENST00000533079 CFAP46Q8IYW2 2715 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 A0A1B0GTQ1 180 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 A0A1W2PQH9 124 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 H0Y8X5 98 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 J3QKU1 62 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 ERVH48-1M5A8F1 160 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 ENC1O14682 589 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 TGFB1I1O43294 461 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 TLX3O43711 291 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-223ENST00000533079 ZSCAN22P10073 491 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-223ENST00000533079 RALAP11233 206 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 ACSL1P33121 698 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 HOXD13P35453 343 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 CYP2J2P51589 502 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 C21orf59P57076 290 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 RACK1P63244 317 aaKnown RBP13.04□□□□□ -0.32
CAPN1-223ENST00000533079 ILKQ13418 452 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 BIRC3Q13489 604 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 PKP1Q13835 747 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 CCDC157Q569K6 752 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms