RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 PDGFRLQ15198 375 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 SPA17Q15506 151 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 CCDC14Q49A88 953 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 OTUD1Q5VV17 481 aaPredicted RBP20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 NUGGCQ68CJ6 796 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 Q6ZNB5 142 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 ADAM32Q8TC27 787 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 FNIP1Q8TF40 1166 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 CTNNBL1Q8WYA6 563 aaPredicted RBP20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 CENPIQ92674 756 aaPredicted RBP20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 IRF7Q92985 503 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 FCRL2Q96LA5 508 aaPredicted RBP20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 CFAP57Q96MR6 1250 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 TBCBQ99426 244 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 PACSIN1Q9BY11 444 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 ADAM33Q9BZ11 813 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 FAM204AQ9H8W3 233 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 LUC7LQ9NQ29 371 aaKnown RBP20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 DDIT4Q9NX09 232 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 ARNTLO00327 626 aa20.16■□□□□ 0.82
PCOLCE-208ENST00000487172 KLKB1P03952 638 aa20.16■□□□□ 0.82
PCOLCE-208ENST00000487172 HMBSP08397 361 aa20.16■□□□□ 0.82
PCOLCE-208ENST00000487172 SLC2A3P11169 496 aa20.16■□□□□ 0.82
PCOLCE-208ENST00000487172 HARS2P49590 506 aaKnown RBP20.16■□□□□ 0.82
PCOLCE-208ENST00000487172 ZNF143P52747 638 aaPredicted RBP20.16■□□□□ 0.82
PCOLCE-208ENST00000487172 MTA1Q13330 715 aa20.16■□□□□ 0.82
PCOLCE-208ENST00000487172 PPP2R5DQ14738 602 aa20.16■□□□□ 0.82
PCOLCE-208ENST00000487172 STRADAQ7RTN6 431 aa20.16■□□□□ 0.82
PCOLCE-208ENST00000487172 UBALD2Q8IYN6 164 aa20.16■□□□□ 0.82
PCOLCE-208ENST00000487172 DNASE1L2Q92874 299 aa20.16■□□□□ 0.82
PCOLCE-208ENST00000487172 ARHGEF26Q96DR7 871 aa20.16■□□□□ 0.82
PCOLCE-208ENST00000487172 BRD9Q9H8M2 597 aa20.16■□□□□ 0.82
PCOLCE-208ENST00000487172 DUS2Q9NX74 493 aaKnown RBP20.16■□□□□ 0.82
PCOLCE-208ENST00000487172 CALCOCO1Q9P1Z2 691 aa20.16■□□□□ 0.82
PCOLCE-208ENST00000487172 UVRAGQ9P2Y5 699 aa20.16■□□□□ 0.82
PCOLCE-208ENST00000487172 STOML2Q9UJZ1 356 aa20.16■□□□□ 0.82
PCOLCE-208ENST00000487172 PCDHA13Q9Y5I0 950 aa20.16■□□□□ 0.82
PCOLCE-208ENST00000487172 C5orf42Q9H799 3197 aa20.16■□□□□ 0.82
PCOLCE-208ENST00000487172 IPO7O95373 1038 aaKnown RBP20.15■□□□□ 0.82
PCOLCE-208ENST00000487172 TFE3P19532 575 aaPredicted RBP20.15■□□□□ 0.82
PCOLCE-208ENST00000487172 CORO1AP31146 461 aaKnown RBP20.15■□□□□ 0.82
PCOLCE-208ENST00000487172 CCR1P32246 355 aa20.15■□□□□ 0.82
PCOLCE-208ENST00000487172 IFNAR2P48551 515 aa20.15■□□□□ 0.82
PCOLCE-208ENST00000487172 CXCR3P49682 368 aa20.15■□□□□ 0.82
PCOLCE-208ENST00000487172 PFKPQ01813 784 aa20.15■□□□□ 0.82
PCOLCE-208ENST00000487172 DEUP1Q05D60 604 aa20.15■□□□□ 0.82
PCOLCE-208ENST00000487172 TCEAL1Q15170 157 aa20.15■□□□□ 0.82
PCOLCE-208ENST00000487172 EML3Q32P44 896 aa20.15■□□□□ 0.82
PCOLCE-208ENST00000487172 BBS7Q8IWZ6 715 aa20.15■□□□□ 0.82
PCOLCE-208ENST00000487172 ADGRG2Q8IZP9 1017 aa20.15■□□□□ 0.82
PCOLCE-208ENST00000487172 TTC16Q8NEE8 873 aa20.15■□□□□ 0.82
PCOLCE-208ENST00000487172 ASIC4Q96FT7 647 aa20.15■□□□□ 0.82
PCOLCE-208ENST00000487172 CNPY3Q9BT09 278 aa20.15■□□□□ 0.82
PCOLCE-208ENST00000487172 LINC00597Q9H2U6 94 aa20.15■□□□□ 0.82
PCOLCE-208ENST00000487172 PAXBP1Q9Y5B6 917 aa20.15■□□□□ 0.82
PCOLCE-208ENST00000487172 KCNU1A8MYU2 1149 aa20.14■□□□□ 0.81
PCOLCE-208ENST00000487172 ARHGAP6O43182 974 aa20.14■□□□□ 0.81
PCOLCE-208ENST00000487172 NARSO43776 548 aaKnown RBP20.14■□□□□ 0.81
PCOLCE-208ENST00000487172 RDXP35241 583 aaKnown RBP20.14■□□□□ 0.81
PCOLCE-208ENST00000487172 OGDHQ02218 1023 aa20.14■□□□□ 0.81
PCOLCE-208ENST00000487172 NME3Q13232 169 aa20.14■□□□□ 0.81
PCOLCE-208ENST00000487172 ZC3H12AQ5D1E8 599 aaKnown RBP20.14■□□□□ 0.81
PCOLCE-208ENST00000487172 BRMS1LQ5PSV4 323 aa20.14■□□□□ 0.81
PCOLCE-208ENST00000487172 SND1Q7KZF4 910 aaKnown RBP eCLIP20.14■□□□□ 0.818e-8■■■□□ 16.2
PCOLCE-208ENST00000487172 DENND1CQ8IV53 801 aa20.14■□□□□ 0.81
PCOLCE-208ENST00000487172 FAM217AQ8IXS0 508 aa20.14■□□□□ 0.81
PCOLCE-208ENST00000487172 ZFYVE19Q96K21 471 aa20.14■□□□□ 0.81
PCOLCE-208ENST00000487172 NUP85Q9BW27 656 aa20.14■□□□□ 0.81
PCOLCE-208ENST00000487172 HPS4Q9NQG7 708 aa20.14■□□□□ 0.81
PCOLCE-208ENST00000487172 PIGVQ9NUD9 493 aa20.14■□□□□ 0.81
PCOLCE-208ENST00000487172 SLC12A6Q9UHW9 1150 aa20.14■□□□□ 0.81
PCOLCE-208ENST00000487172 MUTYHQ9UIF7 546 aa20.14■□□□□ 0.81
PCOLCE-208ENST00000487172 AGO1Q9UL18 857 aaKnown RBP20.14■□□□□ 0.81
PCOLCE-208ENST00000487172 WNT6Q9Y6F9 365 aa20.14■□□□□ 0.81
PCOLCE-208ENST00000487172 APOEP02649 317 aa20.13■□□□□ 0.81
PCOLCE-208ENST00000487172 DESP17661 470 aa20.13■□□□□ 0.81
PCOLCE-208ENST00000487172 CHKAP35790 457 aa20.13■□□□□ 0.81
PCOLCE-208ENST00000487172 MLLT6P55198 1093 aaPredicted RBP20.13■□□□□ 0.81
PCOLCE-208ENST00000487172 KRT83P78385 493 aa20.13■□□□□ 0.81
PCOLCE-208ENST00000487172 ATP11AP98196 1134 aa20.13■□□□□ 0.81
PCOLCE-208ENST00000487172 RUNX3Q13761 415 aa20.13■□□□□ 0.81
PCOLCE-208ENST00000487172 ACAP1Q15027 740 aa20.13■□□□□ 0.81
PCOLCE-208ENST00000487172 C15orf59Q2T9L4 293 aaPredicted RBP20.13■□□□□ 0.81
PCOLCE-208ENST00000487172 RHOT2Q8IXI1 618 aa20.13■□□□□ 0.81
PCOLCE-208ENST00000487172 CPXM2Q8N436 756 aa20.13■□□□□ 0.81
PCOLCE-208ENST00000487172 ATP6V0D2Q8N8Y2 350 aa20.13■□□□□ 0.81
PCOLCE-208ENST00000487172 BTN2A3PQ96KV6 586 aa20.13■□□□□ 0.81
PCOLCE-208ENST00000487172 NCAPGQ9BPX3 1015 aa20.13■□□□□ 0.81
PCOLCE-208ENST00000487172 IRX2Q9BZI1 471 aaPredicted RBP20.13■□□□□ 0.81
PCOLCE-208ENST00000487172 WDCPQ9H6R7 721 aa20.13■□□□□ 0.81
PCOLCE-208ENST00000487172 ARHGEF38Q9NXL2 777 aa20.13■□□□□ 0.81
PCOLCE-208ENST00000487172 LCMT1Q9UIC8 334 aa20.13■□□□□ 0.81
PCOLCE-208ENST00000487172 SYNJ2BP-COX16A0A087WUM0 186 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 CCP110O43303 1012 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 NRDCO43847 1150 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 ACSL4O60488 711 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 MTA2O94776 668 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 NFATC1O95644 943 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 PSMA2P25787 234 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 SLC11A2P49281 568 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms