RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 KIF2AO00139 706 aaPredicted RBP12.32□□□□□ -0.44
RNF13-208ENST00000467996 DDX3YO15523 660 aaKnown RBP12.32□□□□□ -0.44
RNF13-208ENST00000467996 PSTPIP1O43586 416 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 PRPSAP2O60256 369 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 IGLV3-27P01718 113 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 ATP1A1P05023 1023 aaKnown RBP12.32□□□□□ -0.44
RNF13-208ENST00000467996 MBL2P11226 248 aaPredicted RBP12.32□□□□□ -0.44
RNF13-208ENST00000467996 TNNT1P13805 278 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 FOSL2P15408 326 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 PFKLP17858 780 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 CXCR3P49682 368 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 TBX4P57082 545 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 ITIH3Q06033 890 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 TRIP4Q15650 581 aaPredicted RBP12.32□□□□□ -0.44
RNF13-208ENST00000467996 HADHQ16836 314 aaKnown RBP12.32□□□□□ -0.44
RNF13-208ENST00000467996 SMTNL2Q2TAL5 461 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 SND1Q7KZF4 910 aaKnown RBP eCLIP12.32□□□□□ -0.44
RNF13-208ENST00000467996 POLNQ7Z5Q5 900 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 RHOT1Q8IXI2 618 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 CCDC185Q8N715 623 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 ITFG1Q8TB96 612 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 ING5Q8WYH8 240 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 MSLNLQ96KJ4 702 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 FCRL2Q96LA5 508 aaPredicted RBP12.32□□□□□ -0.44
RNF13-208ENST00000467996 NAPGQ99747 312 aaPredicted RBP12.32□□□□□ -0.44
RNF13-208ENST00000467996 SNRNP25Q9BV90 132 aaKnown RBP12.32□□□□□ -0.44
RNF13-208ENST00000467996 S1PR5Q9H228 398 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 ZWILCHQ9H900 591 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 MRPS23Q9Y3D9 190 aaKnown RBP12.32□□□□□ -0.44
RNF13-208ENST00000467996 CTAGE9A4FU28 777 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 SOBPA7XYQ1 873 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 TUBB4AP04350 444 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 CKMP06732 381 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 HMBSP08397 361 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 KRT7P08729 469 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 HDCP19113 662 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 FSHRP23945 695 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 CASQ1P31415 396 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 DNA2P51530 1060 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 SLC7A9P82251 487 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 RPS6KA1Q15418 735 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 BRMS1LQ5PSV4 323 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 LRRC38Q5VT99 294 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 CES5AQ6NT32 575 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 GET4Q7L5D6 327 aaPredicted RBP12.31□□□□□ -0.44
RNF13-208ENST00000467996 ALG3Q92685 438 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 RNF34Q969K3 372 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 ACSF2Q96CM8 615 aaPredicted RBP12.31□□□□□ -0.44
RNF13-208ENST00000467996 SLC39A13Q96H72 371 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 ZFRQ96KR1 1074 aaKnown RBP12.31□□□□□ -0.44
RNF13-208ENST00000467996 CYP2S1Q96SQ9 504 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 KLF16Q9BXK1 252 aaPredicted RBP12.31□□□□□ -0.44
RNF13-208ENST00000467996 SLC46A2Q9BY10 475 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 TKTL2Q9H0I9 626 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 TASP1Q9H6P5 420 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 WDCPQ9H6R7 721 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 ANLNQ9NQW6 1124 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 TMPRSS4Q9NRS4 437 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 KLHL11Q9NVR0 708 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 TMEM51Q9NW97 253 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 ARHGEF38Q9NXL2 777 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 FZD10Q9ULW2 581 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 HBS1LQ9Y450 684 aaKnown RBP12.31□□□□□ -0.44
RNF13-208ENST00000467996 PCDHA3Q9Y5H8 950 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 CPQQ9Y646 472 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 DOCK8Q8NF50 2099 aa12.31□□□□□ -0.44
RNF13-208ENST00000467996 I6L893 689 aaPredicted RBP12.3□□□□□ -0.44
RNF13-208ENST00000467996 APOEP02649 317 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 KRT1P04264 644 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 RARAP10276 462 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 IRF1P10914 325 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 CCR1P32246 355 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 PEX5P50542 639 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 KPNA1P52294 538 aaPredicted RBP12.3□□□□□ -0.44
RNF13-208ENST00000467996 AIF1P55008 147 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 COG7P83436 770 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 ZXDBP98169 803 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 RING1Q06587 406 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 SCAPQ12770 1279 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 PPP2R5DQ14738 602 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 CCDC85BQ15834 202 aaPredicted RBP12.3□□□□□ -0.44
RNF13-208ENST00000467996 CLUL1Q15846 466 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 ATP13A4Q4VNC1 1196 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 ZC3H12AQ5D1E8 599 aaKnown RBP12.3□□□□□ -0.44
RNF13-208ENST00000467996 KCNT1Q5JUK3 1230 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 ERMARDQ5T6L9 678 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 DCAF12L1Q5VU92 463 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 NPAS3Q8IXF0 933 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 KATNAL2Q8IYT4 538 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 UBL4BQ8N7F7 174 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 SMRP1Q8NCR6 262 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 UBE2Q2Q8WVN8 375 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 TEKT4Q8WW24 435 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 HSPH1Q92598 858 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 ZNF592Q92610 1267 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 NTAN1Q96AB6 310 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 PLD4Q96BZ4 506 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 RIPOR3Q96MK2 946 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 PSMB7Q99436 277 aa12.3□□□□□ -0.44
RNF13-208ENST00000467996 SMG9Q9H0W8 520 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms