RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 TDRD15B5MCY1 1934 aaKnown RBP9.37□□□□□ -0.91
TDP1-202ENST00000393452 CASP8AP2Q9UKL3 1982 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 C9IYK1 514 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 NRP1O14786 923 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 SEPT4O43236 478 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 FAM155BO75949 473 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 ZWINTO95229 277 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 METTL18O95568 372 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 GSTA1P08263 222 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 CTSHP09668 335 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 TM4SF4P48230 202 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 MAP3K7CLP57077 242 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 DAOAP59103 153 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 SEMA5AQ13591 1074 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 SLC1A5Q15758 541 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 UPP1Q16831 310 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 FAM182AQ5T1J6 154 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 SYCP2LQ5T4T6 812 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 FAXCQ5TGI0 409 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 SH2D5Q6ZV89 423 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 HFE2Q6ZVN8 426 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 BZW1Q7L1Q6 419 aaKnown RBP9.36□□□□□ -0.91
TDP1-202ENST00000393452 FAM35AQ86V20 835 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 SIX6OS1Q8N1H7 587 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 BANPQ8N9N5 519 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 RNF139Q8WU17 664 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 LRRN4Q8WUT4 740 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 LPPQ93052 612 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 PCED1BQ96HM7 432 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 PLCD4Q9BRC7 762 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 SPC25Q9HBM1 224 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 CNGB3Q9NQW8 809 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 CDH9Q9ULB4 789 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 GABRQQ9UN88 632 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 ARL2BPQ9Y2Y0 163 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 MFHAS1Q9Y4C4 1052 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 TTLL3Q9Y4R7 772 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 PTCH2Q9Y6C5 1203 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 MYBPHLA2RUH7 354 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 HHLA1C9JL84 531 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 M0QYT0 321 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 TRDMT1O14717 391 aaKnown RBP9.36□□□□□ -0.91
TDP1-202ENST00000393452 GSTA2P09210 222 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 PRKCHP24723 683 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 AIF1P55008 147 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 FCGRTP55899 365 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 YWHAGP61981 247 aaKnown RBP eCLIP9.36□□□□□ -0.91
TDP1-202ENST00000393452 SCAPQ12770 1279 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 DPYSQ14117 519 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 ZKSCAN8Q15776 578 aaPredicted RBP9.36□□□□□ -0.91
TDP1-202ENST00000393452 TTC31Q49AM3 519 aaPredicted RBP9.36□□□□□ -0.91
TDP1-202ENST00000393452 HEATR6Q6AI08 1181 aaKnown RBP9.36□□□□□ -0.91
TDP1-202ENST00000393452 TFB1MQ8WVM0 346 aaKnown RBP9.36□□□□□ -0.91
TDP1-202ENST00000393452 HTR3CQ8WXA8 447 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 NTAN1Q96AB6 310 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 PGAP3Q96FM1 320 aaPredicted RBP9.36□□□□□ -0.91
TDP1-202ENST00000393452 SIGLEC10Q96LC7 697 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 MED10Q9BTT4 135 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 ULBP1Q9BZM6 244 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 ARHGAP39Q9C0H5 1083 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 PTPRDP23468 1912 aa9.36□□□□□ -0.91
TDP1-202ENST00000393452 A0A0A0MRY4 1105 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 IQANK1A0A1B0GTG1 560 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 YJEFN3A6XGL0 299 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 E7ENQ6 273 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 H3BRJ5 948 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 TM9SF1O15321 606 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 VAV1P15498 845 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 FLT3LGP49771 235 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 RAB27AP51159 221 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 SCNN1GP51170 649 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 CDK16Q00536 496 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 SEMA3BQ13214 749 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 PTK7Q13308 1070 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 DSC3Q14574 896 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 PRKD1Q15139 912 aaPredicted RBP9.35□□□□□ -0.91
TDP1-202ENST00000393452 GALNTL6Q49A17 601 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 TIGD5Q53EQ6 642 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 CCSAPQ6IQ19 270 aaPredicted RBP9.35□□□□□ -0.91
TDP1-202ENST00000393452 PRPF39Q86UA1 669 aaKnown RBP9.35□□□□□ -0.91
TDP1-202ENST00000393452 ZNF276Q8N554 614 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 RNF169Q8NCN4 708 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 SPATA13Q96N96 652 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 PITPNM3Q9BZ71 974 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 CSNK1G1Q9HCP0 422 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 WDR6Q9NNW5 1121 aaKnown RBP9.35□□□□□ -0.91
TDP1-202ENST00000393452 TMPRSS4Q9NRS4 437 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 PIGVQ9NUD9 493 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 ABCF3Q9NUQ8 709 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 ZC3H7BQ9UGR2 993 aaKnown RBP9.35□□□□□ -0.91
TDP1-202ENST00000393452 ZNF180Q9UJW8 692 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 PADI3Q9ULW8 664 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 STARD13Q9Y3M8 1113 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 TLL2Q9Y6L7 1015 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 DCLK1O15075 740 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 MFSD11O43934 449 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 MGEA5O60502 916 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 AP1G2O75843 785 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 DNAJC8O75937 253 aaPredicted RBP9.35□□□□□ -0.91
TDP1-202ENST00000393452 PCSK1P29120 753 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms