RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 ANKZF1Q9H8Y5 726 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 ZFP69BQ9UJL9 534 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 PTCH2Q9Y6C5 1203 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 CDY1Q9Y6F8 540 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 MYH14Q7Z406 1995 aaKnown RBP13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 CILPO75339 1184 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 RHOBTB1O94844 696 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 SERPINF2P08697 491 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 KRT4P19013 534 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 CCND3P30281 292 aaPredicted RBP13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 LILRA4P59901 499 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 HECTD3Q5T447 861 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 RAP1GAP2Q684P5 730 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 BTAF1O14981 1849 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 TTC4O95801 387 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 MMP8P22894 467 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 PRMT2P55345 433 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 STX3Q13277 289 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 NAA25Q14CX7 972 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 MUM1Q2TAK8 710 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 NPNTQ6UXI9 565 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 ZBTB18Q99592 522 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 APOL5Q9BWW9 433 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 SLC25A13Q9UJS0 675 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 SLC4A7Q9Y6M7 1214 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 GLI3P10071 1580 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 ARL5CA6NH57 179 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 HAUS5O94927 633 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 ESRRBO95718 433 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 RALBP11234 206 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 PECAM1P16284 738 aaPredicted RBP13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 TLE2Q04725 743 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 NETO2Q8NC67 525 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 LRRN4Q8WUT4 740 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 NAT9Q9BTE0 207 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 HTATIP2Q9BUP3 242 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 FUT8Q9BYC5 575 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 TAS2R40P59535 323 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 LBRQ14739 615 aaKnown RBP13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 TTC39BQ5VTQ0 682 aaPredicted RBP13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 MRNIPQ6NTE8 343 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 LVRNQ6Q4G3 990 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 SZRD1Q7Z422 152 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 RBM23Q86U06 439 aaKnown RBP13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 SNX19Q92543 992 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 NDRG1Q92597 394 aaKnown RBP13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 SGSM3Q96HU1 749 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 FAM129AQ9BZQ8 928 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 HSD3B7Q9H2F3 369 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 PPCSQ9HAB8 311 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 APOBEC3GQ9HC16 384 aaKnown RBP13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 LGR5O75473 907 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 MAP4P27816 1152 aaKnown RBP13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 CYP2C18P33260 490 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 MRPS5P82675 430 aaKnown RBP13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 FOXD4Q12950 439 aaPredicted RBP13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 FSCBQ5H9T9 825 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 TMEM63BQ5T3F8 832 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 CACUL1Q86Y37 369 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 LMNTD2Q8IXW0 634 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 ARMC2Q8NEN0 867 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 USP13Q92995 863 aaPredicted RBP13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 TUBB6Q9BUF5 446 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 IARS2Q9NSE4 1012 aaKnown RBP13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 STRCP1A6NGW2 1772 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 COL18A1P39060 1754 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 ZNF197O14709 1029 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 GYG2O15488 501 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 CXCL14O95715 111 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 CSH1P0DML2 217 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 CSH2P0DML3 217 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 ELK3P41970 407 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 RBBP7Q16576 425 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 AGBL2Q5U5Z8 902 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 LZTR1Q8N653 840 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 GBP7Q8N8V2 638 aaPredicted RBP13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 NSMCE4AQ9NXX6 385 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 GTF2IRD1Q9UHL9 959 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 GRID1Q9ULK0 1009 aa13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.49□□□□□ -0.25
PTPRN2-202ENST00000389416 SEC24CP53992 1094 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 ZNF618Q5T7W0 954 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 LCLAT1Q6UWP7 414 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 ALG3Q92685 438 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 ARL8AQ96BM9 186 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 FAM96AQ9H5X1 160 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 CNGB3Q9NQW8 809 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 EPS15L1Q9UBC2 864 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 CACNG4Q9UBN1 327 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 SFMBT1Q9UHJ3 866 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 IRS2Q9Y4H2 1338 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 SPECC1L-ADORA2AF8WAN1 911 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 LZTS3O60299 673 aaPredicted RBP13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 ADH1AP07327 375 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 PPM1AP35813 382 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 RGS4P49798 205 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 GDF6Q6KF10 455 aaPredicted RBP13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 CCDC149Q6ZUS6 474 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 MFN1Q8IWA4 741 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 ZBED3Q96IU2 234 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms