RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 THAP2Q9H0W7 228 aa16.41■□□□□ 0.22
CACNA1A-221ENST00000636012 ELL3Q9HB65 397 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-221ENST00000636012 SNTG2Q9NY99 539 aa16.41■□□□□ 0.22
CACNA1A-221ENST00000636012 CTSEP14091 401 aa16.41■□□□□ 0.22
CACNA1A-221ENST00000636012 EIF2S3P41091 472 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-221ENST00000636012 OVGP1Q12889 678 aa16.41■□□□□ 0.22
CACNA1A-221ENST00000636012 HLA-DQA1Q5Y7H0 255 aa16.41■□□□□ 0.22
CACNA1A-221ENST00000636012 EDEM1Q92611 657 aa16.41■□□□□ 0.22
CACNA1A-221ENST00000636012 ARMC7Q9H6L4 198 aa16.41■□□□□ 0.22
CACNA1A-221ENST00000636012 GPRC5DQ9NZD1 345 aa16.41■□□□□ 0.22
CACNA1A-221ENST00000636012 ZNF609O15014 1411 aa16.41■□□□□ 0.22
CACNA1A-221ENST00000636012 RASA1P20936 1047 aa16.41■□□□□ 0.22
CACNA1A-221ENST00000636012 TRAF2Q12933 501 aa16.41■□□□□ 0.22
CACNA1A-221ENST00000636012 DNAJB3Q8WWF6 145 aa16.41■□□□□ 0.22
CACNA1A-221ENST00000636012 DNAJC1Q96KC8 554 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-221ENST00000636012 UBE2OQ9C0C9 1292 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-221ENST00000636012 CCNT2O60583 730 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 NDUFS2O75306 463 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 SBK1Q52WX2 424 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 R3HCC1LQ7Z5L2 792 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 SETD3Q86TU7 594 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 RIT2Q99578 217 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 ATXN3LQ9H3M9 355 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 RFX7Q2KHR2 1363 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 SMAPO00193 183 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 RBMXL2O75526 392 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 FOXR1Q6PIV2 292 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 CBWD2Q8IUF1 395 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 WDR36Q8NI36 951 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 RGS18Q9NS28 235 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 SMPD4Q9NXE4 827 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 SLC26A4O43511 780 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 SUPT20HL2P0C7V6 817 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 MAPK1P28482 360 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 OR1E1P30953 314 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 NAMPTP43490 491 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 CLK2P49760 499 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 MARSP56192 900 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 CENPCQ03188 943 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 POU6F1Q14863 301 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 FAM171A1Q5VUB5 890 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 MPZL3Q6UWV2 235 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 TMC5Q6UXY8 1006 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 CCDC126Q96EE4 140 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 JCADQ9P266 1359 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 PDS5AQ29RF7 1337 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 SDR42E2A6NKP2 422 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 AGPAT3Q9NRZ7 376 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 PDZK1P1A8MUH7 402 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 NR1I3Q14994 352 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 EDRF1Q3B7T1 1238 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 CDK20Q8IZL9 346 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 AGGF1Q8N302 714 aaeCLIP16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 UBASH3BQ8TF42 649 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 USP7Q93009 1102 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 PPP1R10Q96QC0 940 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 RUSC1Q9BVN2 902 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 DDX43Q9NXZ2 648 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 DNALI1O14645 258 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 FCHO2Q0JRZ9 810 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 MMRN1Q13201 1228 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 NFYCQ13952 458 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 CYLC2Q14093 348 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 ZNF618Q5T7W0 954 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 SKA1Q96BD8 255 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 PHF21BQ96EK2 531 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 XPO6Q96QU8 1125 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 SH3GLB1Q9Y371 365 aa16.4■□□□□ 0.22
CACNA1A-221ENST00000636012 RIBC1Q8N443 379 aaPredicted RBP16.39■□□□□ 0.22
CACNA1A-221ENST00000636012 ATG16L2Q8NAA4 619 aa16.39■□□□□ 0.22
CACNA1A-221ENST00000636012 CLTBP09497 229 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 GSSP48637 474 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 ADSSL1Q8N142 457 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 SEMA4DQ92854 862 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 CDK5RAP1Q96SZ6 601 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 PRDM15P57071 1507 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 ITGALP20701 1170 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 PPP2R1BP30154 601 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 TAF13Q15543 124 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 ARID3BQ8IVW6 561 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 SGSM3Q96HU1 749 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 SETD4Q9NVD3 440 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 LRRC14BA6NHZ5 514 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 HLA-DQA2P01906 255 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 CHRNB3Q05901 458 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 ATP6AP1LQ52LC2 224 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 RASGRP2Q7LDG7 609 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 EPHX4Q8IUS5 362 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 SLC20A1Q8WUM9 679 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 ERP44Q9BS26 406 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 MTA3Q9BTC8 594 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 GPATCH2LQ9NWQ4 482 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 PRKAG3Q9UGI9 489 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 SH3BGRLO75368 114 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 SP100P23497 879 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 CCR4P51679 360 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 SLC47A2Q86VL8 602 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 OMDQ99983 421 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 ELOVL6Q9H5J4 265 aa16.39■□□□□ 0.21
CACNA1A-221ENST00000636012 GBA2Q9HCG7 927 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms