RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 PRRT4C9JH25 899 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 EIF3DO15371 548 aaKnown RBP eCLIP8.26□□□□□ -1.09
CLK1-215ENST00000621181 GJB3O75712 270 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 AP1G2O75843 785 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 UQCRHP07919 91 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 PRKCSHP14314 528 aaPredicted RBP8.26□□□□□ -1.09
CLK1-215ENST00000621181 CD6P30203 668 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 ATICP31939 592 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 DGKGP49619 791 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 CYP24A1Q07973 514 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 GRIK2Q13002 908 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 BIRC3Q13489 604 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 STARD3Q14849 445 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 PSMD6Q15008 389 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 ATL3Q6DD88 541 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 SCARA5Q6ZMJ2 495 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 TOGARAM2Q6ZUX3 1019 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 PDZD3Q86UT5 571 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 XXYLT1Q8NBI6 393 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 ENGASEQ8NFI3 743 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 MYRIPQ8NFW9 859 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 SETD7Q8WTS6 366 aaKnown RBP8.26□□□□□ -1.09
CLK1-215ENST00000621181 WBP2Q969T9 261 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 GABRG3Q99928 467 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 ZDHHC5Q9C0B5 715 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 LRRC27Q9C0I9 530 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 MIR1-1HGQ9H1L0 117 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 PDCL3Q9H2J4 239 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 FBXO44Q9H4M3 255 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 SMYD3Q9H7B4 428 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.26□□□□□ -1.092e-7■■■■■ 64.8
CLK1-215ENST00000621181 TLR8Q9NR97 1041 aaKnown RBP8.26□□□□□ -1.09
CLK1-215ENST00000621181 WDR35Q9P2L0 1181 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 LSM7Q9UK45 103 aaKnown RBP8.26□□□□□ -1.09
CLK1-215ENST00000621181 PYCARDQ9ULZ3 195 aa8.26□□□□□ -1.09
CLK1-215ENST00000621181 CABIN1Q9Y6J0 2220 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 A0A1B0GTW7 788 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 WASH3PC4AMC7 463 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 CLIC2O15247 247 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 TBX18O95935 607 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 CAPNS1P04632 268 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 TPM3P06753 285 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 ZDHHC11BP0C7U3 371 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 HOXD13P35453 343 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 ATP5C1P36542 298 aaKnown RBP8.25□□□□□ -1.09
CLK1-215ENST00000621181 CDH8P55286 799 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 ASIC1P78348 528 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 IQCB1Q15051 598 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 CAMK4Q16566 473 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 COL28A1Q2UY09 1125 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 ZNF699Q32M78 642 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 ANO6Q4KMQ2 910 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 ZNF667Q5HYK9 610 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 CCNI2Q6ZMN8 369 aaPredicted RBP8.25□□□□□ -1.09
CLK1-215ENST00000621181 HTR3DQ70Z44 454 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 LUZP1Q86V48 1076 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 NELFCDQ8IXH7 590 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 C17orf53Q8N3J3 647 aaPredicted RBP8.25□□□□□ -1.09
CLK1-215ENST00000621181 MDM1Q8TC05 714 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 XYLT2Q9H1B5 865 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 TNMDQ9H2S6 317 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 CD248Q9HCU0 757 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 PLK2Q9NYY3 685 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 IL37Q9NZH6 218 aa8.25□□□□□ -1.09
CLK1-215ENST00000621181 FAM92AA1XBS5 289 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 EIF4E1BA6NMX2 242 aaKnown RBP8.24□□□□□ -1.09
CLK1-215ENST00000621181 GFRA2O00451 464 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 TGFB1I1O43294 461 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 STAU1O95793 577 aaKnown RBP8.24□□□□□ -1.09
CLK1-215ENST00000621181 CER1O95813 267 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 NCAM1P13591 858 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 PGFP49763 221 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 MAP3K7CLP57077 242 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 AMPD3Q01432 767 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 FUT11Q495W5 492 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 ARSIQ5FYB1 569 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 FAM26FQ5R3K3 315 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 PAQR9Q6ZVX9 377 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 ACOT1Q86TX2 421 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 FUKQ8N0W3 1084 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 ZCCHC9Q8N567 271 aaKnown RBP8.24□□□□□ -1.09
CLK1-215ENST00000621181 HNRNPLLQ8WVV9 542 aaKnown RBP8.24□□□□□ -1.09
CLK1-215ENST00000621181 ZNF516Q92618 1163 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 TOE1Q96GM8 510 aaKnown RBP8.24□□□□□ -1.09
CLK1-215ENST00000621181 GPR174Q9BXC1 333 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 TRIM9Q9C026 710 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 GOLPH3LQ9H4A5 285 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 GAREM1Q9H706 876 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 PRDM16Q9HAZ2 1276 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 COMMD8Q9NX08 183 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 PCOLCE2Q9UKZ9 415 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 CFAP45Q9UL16 551 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 NFE2L3Q9Y4A8 694 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 PLXNB3Q9ULL4 1909 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 KNTC1P50748 2209 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 SNPHO15079 494 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 BCAT2O15382 392 aaPredicted RBP8.24□□□□□ -1.09
CLK1-215ENST00000621181 SYNCRIPO60506 623 aaKnown RBP8.24□□□□□ -1.09
CLK1-215ENST00000621181 GREM1O60565 184 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 EXOC3O60645 756 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms