RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 ZNF197O14709 1029 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 CYP26A1O43174 497 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 AP5Z1O43299 807 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 PAEPP09466 180 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 VDRP11473 427 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 ALADP13716 330 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 ANXA13P27216 316 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 MFAP3P55082 362 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 GRM2Q14416 872 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 DRAP1Q14919 205 aaPredicted RBP9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 SGO2Q562F6 1265 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 LCE2CQ5TA81 110 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 LCLAT1Q6UWP7 414 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 XKR5Q6UX68 686 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 VITQ6UXI7 678 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 SCD5Q86SK9 330 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 PIGZQ86VD9 579 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 SLC47A2Q86VL8 602 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 WDTC1Q8N5D0 677 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 MAB21L3Q8N8X9 362 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 ANKRD52Q8NB46 1076 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 TTC16Q8NEE8 873 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 RNF38Q9H0F5 515 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 FAM124BQ9H5Z6 455 aaPredicted RBP9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 NMUR1Q9HB89 426 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 FAM207AQ9NSI2 230 aaPredicted RBP9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 GMIPQ9P107 970 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 TJP2Q9UDY2 1190 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 CHORDC1Q9UHD1 332 aaPredicted RBP9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 USP34Q70CQ2 3546 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 VPS13AQ96RL7 3174 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 FAM86C2PA6NEL3 165 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 SMTNL1A8MU46 457 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 F8VZ95 297 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 SASH3O75995 380 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 PDGFBP01127 241 aaPredicted RBP9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 ZDHHC11BP0C7U3 371 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 BMP4P12644 408 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 CDK11BP21127 795 aaKnown RBP9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 TARSP26639 723 aaKnown RBP9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 USP8P40818 1118 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 RGS7P49802 495 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 KIF11P52732 1056 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 JAM2P57087 298 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 ZNF445P59923 1031 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 POLR2FP61218 127 aaKnown RBP9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 UBXN1Q04323 297 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 RAPGEF1Q13905 1077 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 TAF12Q16514 161 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 RAB41Q5JT25 222 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 TMEM31Q5JXX7 168 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 PMF1Q6P1K2 205 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 GAS2L3Q86XJ1 694 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 ARID3BQ8IVW6 561 aaPredicted RBP9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 FAM71AQ8IYT1 594 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 TTC39CQ8N584 583 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 ARL14EPQ8N8R7 260 aaPredicted RBP9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 LEMD2Q8NC56 503 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 RNF214Q8ND24 703 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 OLIG1Q8TAK6 271 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 CLEC4CQ8WTT0 213 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 SLC35F5Q8WV83 523 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 SMARCD2Q92925 531 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 USP13Q92995 863 aaPredicted RBP9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 SECISBP2LQ93073 1101 aaKnown RBP9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 WBP2Q969T9 261 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 ASIC4Q96FT7 647 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 ERGIC2Q96RQ1 377 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 SLITRK6Q9H5Y7 841 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 TASP1Q9H6P5 420 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 CCSER2Q9H7U1 834 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 TRPV4Q9HBA0 871 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 TRPC7Q9HCX4 862 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 NLRC4Q9NPP4 1024 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 PLCB1Q9NQ66 1216 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 GDE1Q9NZC3 331 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 ATP8B3O60423 1300 aa9.97□□□□□ -0.81
NPLOC4-219ENST00000576713 DENND4CQ5VZ89 1909 aa9.96□□□□□ -0.81
NPLOC4-219ENST00000576713 ANAPC1Q9H1A4 1944 aa9.96□□□□□ -0.81
NPLOC4-219ENST00000576713 A0A1W2PQH9 124 aa9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 SHISA7A6NL88 538 aa9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 PRR33A8MZF0 331 aa9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 M0QYV0 167 aa9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 SCAMP3O14828 347 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 WFS1O76024 890 aa9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 OLFM2O95897 454 aa9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 TBX18O95935 607 aa9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 OAS1P00973 400 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 YWHAQP27348 245 aa9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 CDC25CP30307 473 aa9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 GNA15P30679 374 aa9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 PBX1P40424 430 aa9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 GPD2P43304 727 aa9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 YWHAEP62258 255 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 GPC5P78333 572 aa9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 ZXDAP98168 799 aa9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 FANCCQ00597 558 aa9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 TDGQ13569 410 aa9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 NR1I3Q14994 352 aa9.96□□□□□ -0.82
NPLOC4-219ENST00000576713 CNGA2Q16280 664 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms