RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 APBA1Q02410 837 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 CSRP2Q16527 193 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 C10orf76Q5T2E6 689 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 BSPRYQ5W0U4 402 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 ANO7Q6IWH7 933 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 EDEM1Q92611 657 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 BHMTQ93088 406 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 CNOT6LQ96LI5 555 aaKnown RBP15.35■□□□□ 0.05
FANCA-220ENST00000566409 ACOX2Q99424 681 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 ARRDC1-AS1Q9H2J1 176 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 CLSTN2Q9H4D0 955 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 DNAJC17Q9NVM6 304 aaKnown RBP15.35■□□□□ 0.05
FANCA-220ENST00000566409 WDR35Q9P2L0 1181 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 FBXO10Q9UK96 956 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 AGO1Q9UL18 857 aaKnown RBP15.35■□□□□ 0.05
FANCA-220ENST00000566409 STARD13Q9Y3M8 1113 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 SLC12A8A0AV02 714 aa15.34■□□□□ 0.05
FANCA-220ENST00000566409 EPN2O95208 641 aa15.34■□□□□ 0.05
FANCA-220ENST00000566409 PENKP01210 267 aaPredicted RBP15.34■□□□□ 0.05
FANCA-220ENST00000566409 CORO1AP31146 461 aaKnown RBP15.34■□□□□ 0.05
FANCA-220ENST00000566409 LMNB2Q03252 620 aa15.34■□□□□ 0.05
FANCA-220ENST00000566409 TRIP4Q15650 581 aaPredicted RBP15.34■□□□□ 0.05
FANCA-220ENST00000566409 CCDC6Q16204 474 aa15.34■□□□□ 0.05
FANCA-220ENST00000566409 HSF5Q4G112 596 aaPredicted RBP15.34■□□□□ 0.05
FANCA-220ENST00000566409 FYB2Q5VWT5 728 aa15.34■□□□□ 0.05
FANCA-220ENST00000566409 EGFLAMQ63HQ2 1017 aa15.34■□□□□ 0.05
FANCA-220ENST00000566409 GRAMD4Q6IC98 578 aa15.34■□□□□ 0.05
FANCA-220ENST00000566409 GJB7Q6PEY0 223 aa15.34■□□□□ 0.05
FANCA-220ENST00000566409 RSRC2Q7L4I2 434 aaKnown RBP15.34■□□□□ 0.05
FANCA-220ENST00000566409 DENND1CQ8IV53 801 aa15.34■□□□□ 0.05
FANCA-220ENST00000566409 SCML4Q8N228 414 aa15.34■□□□□ 0.05
FANCA-220ENST00000566409 ZNF513Q8N8E2 541 aaPredicted RBP15.34■□□□□ 0.05
FANCA-220ENST00000566409 OLIG1Q8TAK6 271 aa15.34■□□□□ 0.05
FANCA-220ENST00000566409 CLEC4CQ8WTT0 213 aa15.34■□□□□ 0.05
FANCA-220ENST00000566409 LOXL4Q96JB6 756 aa15.34■□□□□ 0.05
FANCA-220ENST00000566409 IPO9Q96P70 1041 aaKnown RBP15.34■□□□□ 0.05
FANCA-220ENST00000566409 CRACR2AQ9BSW2 395 aa15.34■□□□□ 0.05
FANCA-220ENST00000566409 ACP6Q9NPH0 428 aa15.34■□□□□ 0.05
FANCA-220ENST00000566409 CNGB3Q9NQW8 809 aa15.34■□□□□ 0.05
FANCA-220ENST00000566409 SFMBT1Q9UHJ3 866 aa15.34■□□□□ 0.05
FANCA-220ENST00000566409 CLEC4EQ9ULY5 219 aa15.34■□□□□ 0.05
FANCA-220ENST00000566409 CEP192Q8TEP8 1941 aa15.33■□□□□ 0.05
FANCA-220ENST00000566409 PRR5-ARHGAP8B1AHC4 643 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 M0QYV0 167 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 GDF9O60383 454 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 FGFR1OPO95684 399 aaKnown RBP15.33■□□□□ 0.04
FANCA-220ENST00000566409 SLC9A1P19634 815 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 BCKDHBP21953 392 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 ATXN1P54253 815 aaKnown RBP15.33■□□□□ 0.04
FANCA-220ENST00000566409 ARHGAP8P85298 464 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 PUM1Q14671 1186 aaKnown RBP eCLIP15.33■□□□□ 0.04
FANCA-220ENST00000566409 EOGTQ5NDL2 527 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 PLA2G2CQ5R387 149 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 TRIM65Q6PJ69 517 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 PRR23CQ6ZRP0 262 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 ERMP1Q7Z2K6 904 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 FMNL3Q8IVF7 1028 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 FAM217AQ8IXS0 508 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 SIX6OS1Q8N1H7 587 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 FRMD1Q8N878 549 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 MLKLQ8NB16 471 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 KCNV2Q8TDN2 545 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 XPO6Q96QU8 1125 aaKnown RBP15.33■□□□□ 0.04
FANCA-220ENST00000566409 DCLK3Q9C098 648 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 CD248Q9HCU0 757 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 UBE2TQ9NPD8 197 aaPredicted RBP15.33■□□□□ 0.04
FANCA-220ENST00000566409 ZNF510Q9Y2H8 683 aa15.33■□□□□ 0.04
FANCA-220ENST00000566409 TNRC6BQ9UPQ9 1833 aaKnown RBP15.32■□□□□ 0.04
FANCA-220ENST00000566409 A0A1W2PQF6 199 aa15.32■□□□□ 0.04
FANCA-220ENST00000566409 GFRA2O00451 464 aa15.32■□□□□ 0.04
FANCA-220ENST00000566409 WASP42768 502 aa15.32■□□□□ 0.04
FANCA-220ENST00000566409 GPD2P43304 727 aa15.32■□□□□ 0.04
FANCA-220ENST00000566409 RPL34P49207 117 aaKnown RBP15.32■□□□□ 0.04
FANCA-220ENST00000566409 DGKGP49619 791 aa15.32■□□□□ 0.04
FANCA-220ENST00000566409 SF3A2Q15428 464 aaKnown RBP15.32■□□□□ 0.04
FANCA-220ENST00000566409 STILQ15468 1287 aa15.32■□□□□ 0.04
FANCA-220ENST00000566409 DPCR1Q3MIW9 517 aa15.32■□□□□ 0.04
FANCA-220ENST00000566409 PREPLQ4J6C6 727 aaPredicted RBP15.32■□□□□ 0.04
FANCA-220ENST00000566409 DENND1BQ6P3S1 775 aa15.32■□□□□ 0.04
FANCA-220ENST00000566409 CLEC17AQ6ZS10 378 aa15.32■□□□□ 0.04
FANCA-220ENST00000566409 CREBRFQ8IUR6 639 aa15.32■□□□□ 0.04
FANCA-220ENST00000566409 RLN3Q8WXF3 142 aa15.32■□□□□ 0.04
FANCA-220ENST00000566409 PLD4Q96BZ4 506 aa15.32■□□□□ 0.04
FANCA-220ENST00000566409 SMOC1Q9H4F8 434 aa15.32■□□□□ 0.04
FANCA-220ENST00000566409 RXFP3Q9NSD7 469 aa15.32■□□□□ 0.04
FANCA-220ENST00000566409 ABCC13Q9NSE7 274 aa15.32■□□□□ 0.04
FANCA-220ENST00000566409 CYTH4Q9UIA0 394 aa15.32■□□□□ 0.04
FANCA-220ENST00000566409 STRIP2Q9ULQ0 834 aa15.32■□□□□ 0.04
FANCA-220ENST00000566409 PI4KAP42356 2102 aa15.32■□□□□ 0.04
FANCA-220ENST00000566409 BECN2A8MW95 431 aa15.31■□□□□ 0.04
FANCA-220ENST00000566409 MSI1O43347 362 aaKnown RBP15.31■□□□□ 0.04
FANCA-220ENST00000566409 FYNP06241 537 aa15.31■□□□□ 0.04
FANCA-220ENST00000566409 ZNF806P0C7X5 589 aa15.31■□□□□ 0.04
FANCA-220ENST00000566409 NTSR1P30989 418 aa15.31■□□□□ 0.04
FANCA-220ENST00000566409 CHKAP35790 457 aa15.31■□□□□ 0.04
FANCA-220ENST00000566409 MFAP3P55082 362 aa15.31■□□□□ 0.04
FANCA-220ENST00000566409 USP39Q53GS9 565 aaKnown RBP15.31■□□□□ 0.04
FANCA-220ENST00000566409 MSANTD2Q6P1R3 559 aa15.31■□□□□ 0.04
FANCA-220ENST00000566409 DGLUCYQ7Z3D6 616 aa15.31■□□□□ 0.04
FANCA-220ENST00000566409 SCUBE3Q8IX30 993 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms