RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 SPATA18Q8TC71 538 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 SORCS1Q8WY21 1168 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 EEF2KMTQ96G04 330 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 FUBP3Q96I24 572 aaKnown RBP eCLIP7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 CNOT6LQ96LI5 555 aaKnown RBP7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 TWNKQ96RR1 684 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 CGRRF1Q99675 332 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 TTLL2Q9BWV7 592 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 MMRN2Q9H8L6 949 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 NMUR1Q9HB89 426 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 IL21RQ9HBE5 538 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 KRT82Q9NSB4 513 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 CACNA2D2Q9NY47 1150 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 CALCOCO1Q9P1Z2 691 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 CLEC4EQ9ULY5 219 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 PCDHGA5Q9Y5G8 931 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 PCNX2A6NKB5 2137 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 SETXQ7Z333 2677 aaKnown RBP7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 A0A1W2PQF6 199 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 SRRM3A6NNA2 597 aaPredicted RBP7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 NEDD8-MDP1E9PL57 170 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 KCNK3O14649 394 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 TNFRSF10BO14763 440 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 SPTLC2O15270 562 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 POLR2DO15514 142 aaKnown RBP7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 AKAP3O75969 853 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 KIF20AO95235 890 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 OLFM2O95897 454 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 CALCAP01258 141 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 PAX3P23760 479 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 TXLNAP40222 546 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 PTGIRP43119 386 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 CLDN6P56747 220 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 TNNC1P63316 161 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 SHC2P98077 582 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 RELBQ01201 579 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 AMPD2Q01433 879 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 RPL6Q02878 288 aaKnown RBP7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 TRPC3Q13507 836 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 PSMD6Q15008 389 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 ZNF699Q32M78 642 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 FAM26FQ5R3K3 315 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 DAB2IPQ5VWQ8 1189 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 LYSMD4Q5XG99 296 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 VSTM1Q6UX27 236 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 LPCAT2Q7L5N7 544 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 WDR49Q8IV35 697 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 FUKQ8N0W3 1084 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 NUP93Q8N1F7 819 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 ZNF366Q8N895 744 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 ZNF513Q8N8E2 541 aaPredicted RBP7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 ZNF507Q8TCN5 953 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 SLC2A14Q8TDB8 520 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 GATA6Q92908 595 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 C8orf48Q96LL4 319 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 ZNF395Q9H8N7 513 aaPredicted RBP7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 DNAJC17Q9NVM6 304 aaKnown RBP7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 KBTBD4Q9NVX7 518 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 ZNF358Q9NW07 568 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 SERTAD1Q9UHV2 236 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 PILRBQ9UKJ0 227 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 MAPK8IP1Q9UQF2 711 aa7.24□□□□□ -1.25
PRPF40B-214ENST00000551320 TNRC6BQ9UPQ9 1833 aaKnown RBP7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 IGHV1OR15-9A0A0B4J2B8 117 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 A0A1W2PQH9 124 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 STX6O43752 255 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 SH3BP5O60239 455 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 GREM1O60565 184 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 EXOC3O60645 756 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 TRIM49P0CI25 452 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 TRIM49CP0CI26 452 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 PDIA4P13667 645 aaKnown RBP7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 HOXB2P14652 356 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 CD58P19256 250 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 GRIA2P42262 883 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 NASPP49321 788 aaPredicted RBP7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 NDST1P52848 882 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 NOP14P78316 857 aaKnown RBP7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 RING1Q06587 406 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 STK4Q13043 487 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 NUMA1Q14980 2115 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 ZNF394Q53GI3 561 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 CCDC157Q569K6 752 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 C1orf220Q5T0J3 134 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 HECTD3Q5T447 861 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 LAYNQ6UX15 382 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 KIAA1324Q6UXG2 1013 aaKnown RBP7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 FAM124AQ86V42 546 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 SYT12Q8IV01 421 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 ETFBKMTQ8IXQ9 262 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 MINDY1Q8N5J2 469 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 TRIML1Q8N9V2 468 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 XXYLT1Q8NBI6 393 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 KIAA0895Q8NCT3 520 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 WHAMMQ8TF30 809 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 ZCCHC14Q8WYQ9 949 aaKnown RBP7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 DDX1Q92499 740 aaKnown RBP7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 HSPA12BQ96MM6 686 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 SLITRK1Q96PX8 696 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 NACA2Q9H009 215 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms