RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 PMF1-BGLAPU3KQ54 211 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 FPGT-TNNI3KV9GXZ4 949 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 TENM3Q9P273 2699 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 NOTCH4Q99466 2003 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 NAV1Q8NEY1 1877 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 EPPK1P58107 5090 aaKnown RBP2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 WDR19Q8NEZ3 1342 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 A0A0U1RQF3 1178 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 NUDT19A8MXV4 375 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 C1QTNF3-AMACRE9PGA6 284 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 CBX4O00257 560 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 MEIS1O00470 390 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 NRP1O14786 923 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 PAPSS1O43252 624 aaPredicted RBP2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 SIGLEC6O43699 453 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 NOBOXO60393 691 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 CSO75390 466 aaKnown RBP2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 PRPF40AO75400 957 aaKnown RBP2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 TNFSF15O95150 251 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 CYBBP04839 570 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 ICAM1P05362 532 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 THEGLP0DJG4 465 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 NCAM1P13591 858 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 PRKCAP17252 672 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 CKMT2P17540 419 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 IL4RP24394 825 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 SREBF1P36956 1147 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 SLURP1P55000 103 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 CORO7P57737 925 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 DYNLL1P63167 89 aaKnown RBP2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 MVPQ14764 893 aaKnown RBP2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 INF2Q27J81 1249 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 USP41Q3LFD5 358 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 NOMO2Q5JPE7 1267 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 C3orf38Q5JPI3 329 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 CC2D1BQ5T0F9 858 aaKnown RBP2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 MARCH8Q5T0T0 291 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 NT5DC1Q5TFE4 455 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 HLA-DQA1Q5Y7H0 255 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 PAQR3Q6TCH7 311 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 SLC30A10Q6XR72 485 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 PDZD4Q76G19 769 aaPredicted RBP2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 CLEC14AQ86T13 490 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 CLASRPQ8N2M8 674 aaKnown RBP2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 ZCCHC9Q8N567 271 aaKnown RBP2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 CCDC33Q8N5R6 958 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 UBR7Q8N806 425 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 NUP43Q8NFH3 380 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 SMARCC2Q8TAQ2 1214 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 CHTF18Q8WVB6 975 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 HMGB4Q8WW32 186 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 HTR3CQ8WXA8 447 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 C14orf79Q96F83 325 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 FUBP3Q96I24 572 aaKnown RBP eCLIP2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 ZFYVE19Q96K21 471 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 SECISBP2Q96T21 854 aaKnown RBP2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 CDADC1Q9BWV3 514 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 HDAC8Q9BY41 377 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 FOXP3Q9BZS1 431 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 SLITRK6Q9H5Y7 841 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 CHST7Q9NS84 486 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 TBC1D13Q9NVG8 400 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 MCM9Q9NXL9 1143 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 HMG20BQ9P0W2 317 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 NTMQ9P121 344 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 NYAP2Q9P242 653 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 DNAJB4Q9UDY4 337 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 SATB2Q9UPW6 733 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 PCDHA5Q9Y5H7 936 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 PCDHA2Q9Y5H9 948 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 AKAP6Q13023 2319 aa2.45□□□□□ -2.02
TRAV1-1-201ENST00000542354 ANK2Q01484 3957 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 CCDC171Q6TFL3 1326 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 MYH1P12882 1939 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 CEP192Q8TEP8 1941 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 IGHV1OR15-9A0A0B4J2B8 117 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 A0A1B0GVT2 93 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 SH3D21A4FU49 640 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 KDM4EB2RXH2 506 aaPredicted RBP2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 RGS13O14921 159 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 SRGAP3O43295 1099 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 SMARCA5O60264 1052 aaPredicted RBP2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 PLA2G6O60733 806 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 CLEC3AO75596 197 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 LY6G6DO95868 133 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 ITGAVP06756 1048 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 MSL3P1P0C860 447 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 RARGP13631 454 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 ABCB4P21439 1286 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 ACP1P24666 158 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 ADORA1P30542 326 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 SLC6A11P48066 632 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 IST1P53990 364 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 IGBP1P78318 339 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 MRPS21P82921 87 aaKnown RBP2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 BNC1Q01954 994 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 TLE4Q04727 773 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 GRIN1Q05586 938 aa2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 TRIM26Q12899 539 aaPredicted RBP2.44□□□□□ -2.02
TRAV1-1-201ENST00000542354 RUNX3Q13761 415 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms