RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 MAN2B2Q9Y2E5 1009 aa4.34□□□□□ -1.71
HDAC2-208ENST00000520746 SNX14Q9Y5W7 946 aa4.34□□□□□ -1.71
HDAC2-208ENST00000520746 PLCH2O75038 1416 aa4.34□□□□□ -1.71
HDAC2-208ENST00000520746 C9orf84Q5VXU9 1444 aa4.34□□□□□ -1.71
HDAC2-208ENST00000520746 MAGI2Q86UL8 1455 aa4.34□□□□□ -1.71
HDAC2-208ENST00000520746 EFCAB5A4FU69 1503 aa4.34□□□□□ -1.71
HDAC2-208ENST00000520746 RAPGEF6Q8TEU7 1601 aa4.34□□□□□ -1.71
HDAC2-208ENST00000520746 CTTNBP2Q8WZ74 1663 aa4.34□□□□□ -1.71
HDAC2-208ENST00000520746 FER1L4A9Z1Z3 1794 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 NUP153P49790 1475 aaKnown RBP4.33□□□□□ -1.72
HDAC2-208ENST00000520746 TRAPPC8Q9Y2L5 1435 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 SPAG9O60271 1321 aaKnown RBP4.33□□□□□ -1.72
HDAC2-208ENST00000520746 CYP2D7A0A087X1C5 515 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 A1L4Q6 167 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 CLCA1A8K7I4 914 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 CD3EAPO15446 510 aaKnown RBP4.33□□□□□ -1.72
HDAC2-208ENST00000520746 FESP07332 822 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 HGFP14210 728 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 LIPAP38571 399 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 HTR3AP46098 478 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 ALDH9A1P49189 494 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 RGS19P49795 217 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 PDE1AP54750 535 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 DAZAP2Q15038 168 aaPredicted RBP4.33□□□□□ -1.72
HDAC2-208ENST00000520746 SLC35G1Q2M3R5 365 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 ZNF618Q5T7W0 954 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 PXDC1Q5TGL8 231 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 KRT28Q7Z3Y7 464 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 CNGA4Q8IV77 575 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 ADAMTS15Q8TE58 950 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 XAGE5Q8WWM1 108 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 R3HDM4Q96D70 268 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 ZBTB45Q96K62 511 aaPredicted RBP4.33□□□□□ -1.72
HDAC2-208ENST00000520746 C5orf34Q96MH7 638 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 C17orf80Q9BSJ5 609 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 MAGEB5Q9BZ81 275 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 FAM83DQ9H4H8 585 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 ARFGAP3Q9NP61 516 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 PDGFCQ9NRA1 345 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 CCNL1Q9UK58 526 aaPredicted RBP4.33□□□□□ -1.72
HDAC2-208ENST00000520746 CAPN11Q9UMQ6 739 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 USP22Q9UPT9 525 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 AFG3L2Q9Y4W6 797 aa4.33□□□□□ -1.72
HDAC2-208ENST00000520746 SPATA31D1Q6ZQQ2 1576 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 PTPRTO14522 1441 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 CLIP1P30622 1438 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 A0A087WZ62 844 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 CCDC187A0A096LP49 1063 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 VNN1O95497 513 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 NDST3O95803 873 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 SETSIPP0DME0 302 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 EEF1GP26641 437 aaKnown RBP4.32□□□□□ -1.72
HDAC2-208ENST00000520746 EPHA3P29320 983 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 UQCRC1P31930 480 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 ATICP31939 592 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 HSPA7P48741 367 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 PLCD1P51178 756 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 PGDP52209 483 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 BCAT1P54687 386 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 MORC3Q14149 939 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 MPEG1Q2M385 716 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 Q4G0T1 1027 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 DGKKQ5KSL6 1271 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 C1orf228Q6PIY5 440 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 CRTC1Q6UUV9 634 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 CAND1Q86VP6 1230 aaKnown RBP4.32□□□□□ -1.72
HDAC2-208ENST00000520746 CHSY1Q86X52 802 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 SPICE1Q8N0Z3 855 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 PNLDC1Q8NA58 520 aaKnown RBP4.32□□□□□ -1.72
HDAC2-208ENST00000520746 C8orf58Q8NAV2 365 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 SNX27Q96L92 541 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 DPCDQ9BVM2 203 aaPredicted RBP4.32□□□□□ -1.72
HDAC2-208ENST00000520746 EIF2AQ9BY44 585 aaKnown RBP4.32□□□□□ -1.72
HDAC2-208ENST00000520746 DLL3Q9NYJ7 618 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 TAGLN3Q9UI15 199 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 CDC23Q9UJX2 597 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 HPSEQ9Y251 543 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 HECW1Q76N89 1606 aa4.32□□□□□ -1.72
HDAC2-208ENST00000520746 ARHGAP5Q13017 1502 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.31□□□□□ -1.72
HDAC2-208ENST00000520746 ARHGEF40Q8TER5 1519 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 PRR23D1E9PI22 279 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-208ENST00000520746 PSMD9O00233 223 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 IL6RP08887 468 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-208ENST00000520746 PRR23D2P0DMB1 279 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-208ENST00000520746 IDEP14735 1019 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 YY1P25490 414 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 CCKARP32238 428 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 CYP2C18P33260 490 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 PPM1AP35813 382 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 TECP42680 631 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 MTHFSP49914 203 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 GATMP50440 423 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 COPAP53621 1224 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 EEFSECP57772 596 aaKnown RBP4.31□□□□□ -1.72
HDAC2-208ENST00000520746 CYP4F2P78329 520 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 TRIP6Q15654 476 aaKnown RBP4.31□□□□□ -1.72
HDAC2-208ENST00000520746 MIDNQ504T8 468 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 MANEALQ5VSG8 457 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 MZT2AQ6P582 158 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms