RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 APOL6Q9BWW8 343 aa19■□□□□ 0.63
SDC2-202ENST00000518385 SLC4A5Q9BY07 1137 aa19■□□□□ 0.63
SDC2-202ENST00000518385 TBK1Q9UHD2 729 aa19■□□□□ 0.63
SDC2-202ENST00000518385 GGT7Q9UJ14 662 aa19■□□□□ 0.63
SDC2-202ENST00000518385 A8MUI8 341 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 A8MXQ7 604 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 GCAP28676 217 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 GNL1P36915 607 aaPredicted RBP18.99■□□□□ 0.63
SDC2-202ENST00000518385 VHLP40337 213 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 ZNF143P52747 638 aaPredicted RBP18.99■□□□□ 0.63
SDC2-202ENST00000518385 OCRLQ01968 901 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 CDK18Q07002 472 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 KLC1Q07866 573 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 ORC1Q13415 861 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 DSC3Q14574 896 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 GOLGA7BQ2TAP0 167 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 SPOCD1Q6ZMY3 1216 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 CHSY1Q86X52 802 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 ATP11CQ8NB49 1132 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 APPL2Q8NEU8 664 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 OR6B3Q8NGW1 331 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 TNIP3Q96KP6 325 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 C9orf72Q96LT7 481 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 CNPY3Q9BT09 278 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 CXCL16Q9H2A7 254 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 RNF39Q9H2S5 420 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 SNX25Q9H3E2 840 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 METTL5Q9NRN9 209 aaKnown RBP18.99■□□□□ 0.63
SDC2-202ENST00000518385 R3HDM2Q9Y2K5 976 aaKnown RBP18.99■□□□□ 0.63
SDC2-202ENST00000518385 MTO1Q9Y2Z2 717 aaKnown RBP18.99■□□□□ 0.63
SDC2-202ENST00000518385 SCN1AP35498 2009 aa18.99■□□□□ 0.63
SDC2-202ENST00000518385 PPEF2O14830 753 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 HUS1O60921 280 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 FAM155BO75949 473 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 PFKMP08237 780 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 PAX3P23760 479 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 GJA8P48165 433 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 SLC25A11Q02978 314 aaKnown RBP18.98■□□□□ 0.63
SDC2-202ENST00000518385 DNAJC3Q13217 504 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 BFSP2Q13515 415 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 SEPT7Q16181 437 aaKnown RBP18.98■□□□□ 0.63
SDC2-202ENST00000518385 GLRA4Q5JXX5 417 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 ZFYVE27Q5T4F4 411 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 FAM47EQ6ZV65 393 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 ARCQ7LC44 396 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 NLRP9Q7RTR0 991 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 ACOT1Q86TX2 421 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 TMEM130Q8N3G9 435 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 JOSD2Q8TAC2 188 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 UBA3Q8TBC4 463 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 SLC35F5Q8WV83 523 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 DNAJC9Q8WXX5 260 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 ZNF75CPQ92670 426 aaPredicted RBP18.98■□□□□ 0.63
SDC2-202ENST00000518385 PPP1R10Q96QC0 940 aaKnown RBP18.98■□□□□ 0.63
SDC2-202ENST00000518385 MLXIPLQ9NP71 852 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 FAM105AQ9NUU6 356 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 LRCH1Q9Y2L9 728 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 GIT1Q9Y2X7 761 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.98■□□□□ 0.63
SDC2-202ENST00000518385 DPYSL4O14531 572 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 LRCH4O75427 683 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 SPAG6O75602 509 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 T-ENOLP0DO92 83 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 COL6A1P12109 1028 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 SKIP12755 728 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 SELPP16109 830 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 GPD1P21695 349 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 WARSP23381 471 aaKnown RBP18.98■□□□□ 0.63
SDC2-202ENST00000518385 ACADSBP45954 432 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 RAB27AP51159 221 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 VCPP55072 806 aaKnown RBP18.98■□□□□ 0.63
SDC2-202ENST00000518385 MBTPS1Q14703 1052 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 TAZQ16635 292 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 PPP1R26Q5T8A7 1209 aaPredicted RBP18.98■□□□□ 0.63
SDC2-202ENST00000518385 FAM102AQ5T9C2 384 aaPredicted RBP18.98■□□□□ 0.63
SDC2-202ENST00000518385 C1orf53Q5VUE5 145 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 MFSD7Q6UXD7 560 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 ANKRD33Q7Z3H0 272 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 MRPL10Q7Z7H8 261 aaKnown RBP18.98■□□□□ 0.63
SDC2-202ENST00000518385 TRIM42Q8IWZ5 723 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 ANKRD52Q8NB46 1076 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 ZFAND2BQ8WV99 257 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 PAIP2Q9BPZ3 127 aaKnown RBP18.98■□□□□ 0.63
SDC2-202ENST00000518385 DHRS4Q9BTZ2 278 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 TRIM55Q9BYV6 548 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 KLK14Q9P0G3 267 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 HAO1Q9UJM8 370 aa18.98■□□□□ 0.63
SDC2-202ENST00000518385 DNAH12Q6ZR08 3092 aa18.97■□□□□ 0.63
SDC2-202ENST00000518385 hCG_1818297A0A087WSY0 165 aa18.97■□□□□ 0.63
SDC2-202ENST00000518385 MGEA5O60502 916 aa18.97■□□□□ 0.63
SDC2-202ENST00000518385 ZNF623O75123 536 aa18.97■□□□□ 0.63
SDC2-202ENST00000518385 CDKN2BP42772 138 aa18.97■□□□□ 0.63
SDC2-202ENST00000518385 RPL34P49207 117 aaKnown RBP18.97■□□□□ 0.63
SDC2-202ENST00000518385 BCAT1P54687 386 aa18.97■□□□□ 0.63
SDC2-202ENST00000518385 ARL4CP56559 192 aa18.97■□□□□ 0.63
SDC2-202ENST00000518385 BST2Q10589 180 aaKnown RBP18.97■□□□□ 0.63
SDC2-202ENST00000518385 TRIP13Q15645 432 aaPredicted RBP18.97■□□□□ 0.63
SDC2-202ENST00000518385 RNASEH2BQ5TBB1 312 aaKnown RBP18.97■□□□□ 0.63
SDC2-202ENST00000518385 OR6B2Q6IFH4 312 aa18.97■□□□□ 0.63
SDC2-202ENST00000518385 ADGRD1Q6QNK2 874 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms