RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 ULBP1Q9BZM6 244 aa8.7□□□□□ -1.02
APP-216ENST00000491395 CD248Q9HCU0 757 aa8.7□□□□□ -1.02
APP-216ENST00000491395 TMEM9BQ9NQ34 198 aa8.7□□□□□ -1.02
APP-216ENST00000491395 CACNA2D2Q9NY47 1150 aa8.7□□□□□ -1.02
APP-216ENST00000491395 COQ4Q9Y3A0 265 aa8.7□□□□□ -1.02
APP-216ENST00000491395 RAD54BQ9Y620 910 aa8.7□□□□□ -1.02
APP-216ENST00000491395 SLC12A8A0AV02 714 aa8.69□□□□□ -1.02
APP-216ENST00000491395 CDX4O14627 284 aaPredicted RBP8.69□□□□□ -1.02
APP-216ENST00000491395 GIPC1O14908 333 aa8.69□□□□□ -1.02
APP-216ENST00000491395 ZBED1O96006 694 aa8.69□□□□□ -1.02
APP-216ENST00000491395 PENKP01210 267 aaPredicted RBP8.69□□□□□ -1.02
APP-216ENST00000491395 CD19P15391 556 aa8.69□□□□□ -1.02
APP-216ENST00000491395 CD44P16070 742 aaKnown RBP8.69□□□□□ -1.02
APP-216ENST00000491395 ITPKAP23677 461 aa8.69□□□□□ -1.02
APP-216ENST00000491395 PMLP29590 882 aa8.69□□□□□ -1.02
APP-216ENST00000491395 CORO1AP31146 461 aaKnown RBP8.69□□□□□ -1.02
APP-216ENST00000491395 MFAP3P55082 362 aa8.69□□□□□ -1.02
APP-216ENST00000491395 YWHAGP61981 247 aaKnown RBP eCLIP8.69□□□□□ -1.02
APP-216ENST00000491395 COG7P83436 770 aa8.69□□□□□ -1.02
APP-216ENST00000491395 UAP1L1Q3KQV9 507 aa8.69□□□□□ -1.02
APP-216ENST00000491395 COBLL1Q53SF7 1204 aa8.69□□□□□ -1.02
APP-216ENST00000491395 SGO2Q562F6 1265 aa8.69□□□□□ -1.02
APP-216ENST00000491395 TRIM61Q5EBN2 209 aa8.69□□□□□ -1.02
APP-216ENST00000491395 FYB2Q5VWT5 728 aa8.69□□□□□ -1.02
APP-216ENST00000491395 LYSMD4Q5XG99 296 aa8.69□□□□□ -1.02
APP-216ENST00000491395 PM20D1Q6GTS8 502 aa8.69□□□□□ -1.02
APP-216ENST00000491395 PSAPL1Q6NUJ1 521 aa8.69□□□□□ -1.02
APP-216ENST00000491395 RSRC2Q7L4I2 434 aaKnown RBP8.69□□□□□ -1.02
APP-216ENST00000491395 SYT12Q8IV01 421 aa8.69□□□□□ -1.02
APP-216ENST00000491395 DENND1CQ8IV53 801 aa8.69□□□□□ -1.02
APP-216ENST00000491395 ARHGAP18Q8N392 663 aa8.69□□□□□ -1.02
APP-216ENST00000491395 UBR7Q8N806 425 aa8.69□□□□□ -1.02
APP-216ENST00000491395 UBA3Q8TBC4 463 aa8.69□□□□□ -1.02
APP-216ENST00000491395 IPO4Q8TEX9 1081 aaKnown RBP8.69□□□□□ -1.02
APP-216ENST00000491395 SMARCE1Q969G3 411 aa8.69□□□□□ -1.02
APP-216ENST00000491395 SLC35C1Q96A29 364 aa8.69□□□□□ -1.02
APP-216ENST00000491395 GABRG3Q99928 467 aa8.69□□□□□ -1.02
APP-216ENST00000491395 DCLK3Q9C098 648 aa8.69□□□□□ -1.02
APP-216ENST00000491395 SLC6A17Q9H1V8 727 aa8.69□□□□□ -1.02
APP-216ENST00000491395 MARCH2Q9P0N8 246 aa8.69□□□□□ -1.02
APP-216ENST00000491395 CALCOCO1Q9P1Z2 691 aa8.69□□□□□ -1.02
APP-216ENST00000491395 ARMCX3Q9UH62 379 aaPredicted RBP8.69□□□□□ -1.02
APP-216ENST00000491395 FBXO10Q9UK96 956 aa8.69□□□□□ -1.02
APP-216ENST00000491395 TSPAN16Q9UKR8 245 aa8.69□□□□□ -1.02
APP-216ENST00000491395 AGO1Q9UL18 857 aaKnown RBP8.69□□□□□ -1.02
APP-216ENST00000491395 CLEC4EQ9ULY5 219 aa8.69□□□□□ -1.02
APP-216ENST00000491395 CYP8B1Q9UNU6 501 aa8.69□□□□□ -1.02
APP-216ENST00000491395 ZNF510Q9Y2H8 683 aa8.69□□□□□ -1.02
APP-216ENST00000491395 ATXN2Q99700 1313 aaKnown RBP8.69□□□□□ -1.02
APP-216ENST00000491395 MYOFQ9NZM1 2061 aa8.69□□□□□ -1.02
APP-216ENST00000491395 SPAG17Q6Q759 2223 aa8.69□□□□□ -1.02
APP-216ENST00000491395 MAP1BP46821 2468 aaKnown RBP8.68□□□□□ -1.02
APP-216ENST00000491395 IGHV1OR15-9A0A0B4J2B8 117 aa8.68□□□□□ -1.02
APP-216ENST00000491395 YJEFN3A6XGL0 299 aa8.68□□□□□ -1.02
APP-216ENST00000491395 E7ENQ6 273 aa8.68□□□□□ -1.02
APP-216ENST00000491395 XPO1O14980 1071 aaKnown RBP8.68□□□□□ -1.02
APP-216ENST00000491395 ZBTB24O43167 697 aaPredicted RBP8.68□□□□□ -1.02
APP-216ENST00000491395 TSPAN3O60637 253 aa8.68□□□□□ -1.02
APP-216ENST00000491395 CALCAP01258 141 aa8.68□□□□□ -1.02
APP-216ENST00000491395 NDUFV2P19404 249 aa8.68□□□□□ -1.02
APP-216ENST00000491395 CHKAP35790 457 aa8.68□□□□□ -1.02
APP-216ENST00000491395 MAPK8P45983 427 aa8.68□□□□□ -1.02
APP-216ENST00000491395 FMO5P49326 533 aa8.68□□□□□ -1.02
APP-216ENST00000491395 NOVA1P51513 510 aaKnown RBP8.68□□□□□ -1.02
APP-216ENST00000491395 SLC8A3P57103 927 aa8.68□□□□□ -1.02
APP-216ENST00000491395 NUCB2P80303 420 aa8.68□□□□□ -1.02
APP-216ENST00000491395 RPL6Q02878 288 aaKnown RBP8.68□□□□□ -1.02
APP-216ENST00000491395 LRRC63Q05C16 580 aa8.68□□□□□ -1.02
APP-216ENST00000491395 ADIGQ0VDE8 80 aa8.68□□□□□ -1.02
APP-216ENST00000491395 BECN1Q14457 450 aa8.68□□□□□ -1.02
APP-216ENST00000491395 GEN1Q17RS7 908 aa8.68□□□□□ -1.02
APP-216ENST00000491395 SPDYCQ5MJ68 293 aa8.68□□□□□ -1.02
APP-216ENST00000491395 SH3PXD2AQ5TCZ1 1133 aa8.68□□□□□ -1.02
APP-216ENST00000491395 DAB2IPQ5VWQ8 1189 aa8.68□□□□□ -1.02
APP-216ENST00000491395 BHLHA9Q7RTU4 235 aa8.68□□□□□ -1.02
APP-216ENST00000491395 TFAP2BQ92481 460 aa8.68□□□□□ -1.02
APP-216ENST00000491395 EDEM1Q92611 657 aa8.68□□□□□ -1.02
APP-216ENST00000491395 KAT5Q92993 513 aa8.68□□□□□ -1.02
APP-216ENST00000491395 TIGD1Q96MW7 591 aa8.68□□□□□ -1.02
APP-216ENST00000491395 FAM124BQ9H5Z6 455 aaPredicted RBP8.68□□□□□ -1.02
APP-216ENST00000491395 LRRC4Q9HBW1 653 aa8.68□□□□□ -1.02
APP-216ENST00000491395 CD93Q9NPY3 652 aa8.68□□□□□ -1.02
APP-216ENST00000491395 FSCN3Q9NQT6 498 aa8.68□□□□□ -1.02
APP-216ENST00000491395 HESX1Q9UBX0 185 aa8.68□□□□□ -1.02
APP-216ENST00000491395 EVLQ9UI08 416 aaPredicted RBP8.68□□□□□ -1.02
APP-216ENST00000491395 PILRBQ9UKJ0 227 aa8.68□□□□□ -1.02
APP-216ENST00000491395 MAN1B1Q9UKM7 699 aa8.68□□□□□ -1.02
APP-216ENST00000491395 STRIP2Q9ULQ0 834 aa8.68□□□□□ -1.02
APP-216ENST00000491395 SLC27A6Q9Y2P4 619 aa8.68□□□□□ -1.02
APP-216ENST00000491395 STON1Q9Y6Q2 735 aa8.68□□□□□ -1.02
APP-216ENST00000491395 PPP1R3GB7ZBB8 358 aa8.67□□□□□ -1.02
APP-216ENST00000491395 RNF225M0QZC1 329 aaPredicted RBP8.67□□□□□ -1.02
APP-216ENST00000491395 O00370 1275 aa8.67□□□□□ -1.02
APP-216ENST00000491395 GFRA2O00451 464 aa8.67□□□□□ -1.02
APP-216ENST00000491395 PSMA7O14818 248 aa8.67□□□□□ -1.02
APP-216ENST00000491395 AP5Z1O43299 807 aa8.67□□□□□ -1.02
APP-216ENST00000491395 ZNF217O75362 1048 aa8.67□□□□□ -1.02
APP-216ENST00000491395 GABBR2O75899 941 aa8.67□□□□□ -1.02
APP-216ENST00000491395 KRT37O76014 449 aa8.67□□□□□ -1.02
APP-216ENST00000491395 CFIP05156 583 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms