RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 FAM149B1Q96BN6 582 aa25.11■■□□□ 1.61
CPNE1-223ENST00000475146 XPO6Q96QU8 1125 aaKnown RBP25.11■■□□□ 1.61
CPNE1-223ENST00000475146 DNAJC17Q9NVM6 304 aaKnown RBP25.11■■□□□ 1.61
CPNE1-223ENST00000475146 MARK1Q9P0L2 795 aa25.11■■□□□ 1.61
CPNE1-223ENST00000475146 HBS1LQ9Y450 684 aaKnown RBP25.11■■□□□ 1.61
CPNE1-223ENST00000475146 MSI1O43347 362 aaKnown RBP25.1■■□□□ 1.61
CPNE1-223ENST00000475146 HOXC13P31276 330 aa25.1■■□□□ 1.61
CPNE1-223ENST00000475146 PREPLQ4J6C6 727 aaPredicted RBP25.1■■□□□ 1.61
CPNE1-223ENST00000475146 SMYD5Q6GMV2 418 aa25.1■■□□□ 1.61
CPNE1-223ENST00000475146 GRAMD4Q6IC98 578 aa25.1■■□□□ 1.61
CPNE1-223ENST00000475146 DPY19L2P1Q6NXN4 242 aa25.1■■□□□ 1.61
CPNE1-223ENST00000475146 SLC4A5Q9BY07 1137 aa25.1■■□□□ 1.61
CPNE1-223ENST00000475146 CYTH4Q9UIA0 394 aa25.1■■□□□ 1.61
CPNE1-223ENST00000475146 AGO1Q9UL18 857 aaKnown RBP25.1■■□□□ 1.61
CPNE1-223ENST00000475146 TBC1D3BA6NDS4 549 aa25.09■■□□□ 1.61
CPNE1-223ENST00000475146 E5RJQ4 531 aa25.09■■□□□ 1.61
CPNE1-223ENST00000475146 CACNG3O60359 315 aa25.09■■□□□ 1.61
CPNE1-223ENST00000475146 UCHL3P15374 230 aa25.09■■□□□ 1.61
CPNE1-223ENST00000475146 CHKAP35790 457 aa25.09■■□□□ 1.61
CPNE1-223ENST00000475146 RPL34P49207 117 aaKnown RBP25.09■■□□□ 1.61
CPNE1-223ENST00000475146 HARS2P49590 506 aaKnown RBP25.09■■□□□ 1.61
CPNE1-223ENST00000475146 PDCLQ13371 301 aa25.09■■□□□ 1.61
CPNE1-223ENST00000475146 DMC1Q14565 340 aa25.09■■□□□ 1.61
CPNE1-223ENST00000475146 TRIP4Q15650 581 aaPredicted RBP25.09■■□□□ 1.61
CPNE1-223ENST00000475146 MSANTD2Q6P1R3 559 aa25.09■■□□□ 1.61
CPNE1-223ENST00000475146 SYT13Q7L8C5 426 aa25.09■■□□□ 1.61
CPNE1-223ENST00000475146 SLC47A2Q86VL8 602 aa25.09■■□□□ 1.61
CPNE1-223ENST00000475146 LONP2Q86WA8 852 aa25.09■■□□□ 1.61
CPNE1-223ENST00000475146 FAM71AQ8IYT1 594 aa25.09■■□□□ 1.61
CPNE1-223ENST00000475146 PHTF2Q8N3S3 785 aa25.09■■□□□ 1.61
CPNE1-223ENST00000475146 HHIPQ96QV1 700 aa25.09■■□□□ 1.61
CPNE1-223ENST00000475146 PLK2Q9NYY3 685 aa25.09■■□□□ 1.61
CPNE1-223ENST00000475146 KIAA1549LQ6ZVL6 1849 aa25.09■■□□□ 1.61
CPNE1-223ENST00000475146 ANTXRLA6NF34 631 aa25.08■■□□□ 1.61
CPNE1-223ENST00000475146 NCAM1P13591 858 aa25.08■■□□□ 1.61
CPNE1-223ENST00000475146 HOXA6P31267 233 aa25.08■■□□□ 1.61
CPNE1-223ENST00000475146 CLCN1P35523 988 aa25.08■■□□□ 1.61
CPNE1-223ENST00000475146 KRT9P35527 623 aa25.08■■□□□ 1.61
CPNE1-223ENST00000475146 PXNP49023 591 aaPredicted RBP25.08■■□□□ 1.61
CPNE1-223ENST00000475146 COPB1P53618 953 aaKnown RBP25.08■■□□□ 1.61
CPNE1-223ENST00000475146 BPIFB4P59827 614 aa25.08■■□□□ 1.61
CPNE1-223ENST00000475146 MRPS21P82921 87 aaKnown RBP25.08■■□□□ 1.61
CPNE1-223ENST00000475146 NUDT18Q6ZVK8 323 aa25.08■■□□□ 1.61
CPNE1-223ENST00000475146 CCDC33Q8N5R6 958 aa25.08■■□□□ 1.61
CPNE1-223ENST00000475146 AOPEPQ8N6M6 819 aa25.08■■□□□ 1.61
CPNE1-223ENST00000475146 HINFPQ9BQA5 517 aa25.08■■□□□ 1.61
CPNE1-223ENST00000475146 NAT10Q9H0A0 1025 aaKnown RBP25.08■■□□□ 1.61
CPNE1-223ENST00000475146 PCDHGC3Q9UN70 934 aa25.08■■□□□ 1.61
CPNE1-223ENST00000475146 CEP83Q9Y592 693 aa25.08■■□□□ 1.61
CPNE1-223ENST00000475146 TRIM24O15164 1050 aa25.07■■□□□ 1.6
CPNE1-223ENST00000475146 CDK11BP21127 795 aaKnown RBP25.07■■□□□ 1.6
CPNE1-223ENST00000475146 TIE1P35590 1138 aa25.07■■□□□ 1.6
CPNE1-223ENST00000475146 TNFRSF4P43489 277 aa25.07■■□□□ 1.6
CPNE1-223ENST00000475146 ANO6Q4KMQ2 910 aa25.07■■□□□ 1.6
CPNE1-223ENST00000475146 C10orf76Q5T2E6 689 aa25.07■■□□□ 1.6
CPNE1-223ENST00000475146 TMEM110Q86TL2 294 aa25.07■■□□□ 1.6
CPNE1-223ENST00000475146 TERB1Q8NA31 727 aa25.07■■□□□ 1.6
CPNE1-223ENST00000475146 SUMF1Q8NBK3 374 aa25.07■■□□□ 1.6
CPNE1-223ENST00000475146 C1orf131Q8NDD1 294 aaKnown RBP25.07■■□□□ 1.6
CPNE1-223ENST00000475146 EPC1Q9H2F5 836 aa25.07■■□□□ 1.6
CPNE1-223ENST00000475146 PDCL3Q9H2J4 239 aa25.07■■□□□ 1.6
CPNE1-223ENST00000475146 PLCB1Q9NQ66 1216 aa25.07■■□□□ 1.6
CPNE1-223ENST00000475146 SMG5Q9UPR3 1016 aaKnown RBP25.07■■□□□ 1.6
CPNE1-223ENST00000475146 PAPSS1O43252 624 aaPredicted RBP25.06■■□□□ 1.6
CPNE1-223ENST00000475146 CYBBP04839 570 aa25.06■■□□□ 1.6
CPNE1-223ENST00000475146 KLK7P49862 253 aa25.06■■□□□ 1.6
CPNE1-223ENST00000475146 NCAPHQ15003 741 aa25.06■■□□□ 1.6
CPNE1-223ENST00000475146 EMC10Q5UCC4 262 aa25.06■■□□□ 1.6
CPNE1-223ENST00000475146 WDR5BQ86VZ2 330 aa25.06■■□□□ 1.6
CPNE1-223ENST00000475146 ALLCQ8N6M5 410 aa25.06■■□□□ 1.6
CPNE1-223ENST00000475146 PCMTD1Q96MG8 357 aaPredicted RBP25.06■■□□□ 1.6
CPNE1-223ENST00000475146 NOX5Q96PH1 765 aa25.06■■□□□ 1.6
CPNE1-223ENST00000475146 TRIM62Q9BVG3 475 aa25.06■■□□□ 1.6
CPNE1-223ENST00000475146 NAA15Q9BXJ9 866 aaKnown RBP25.06■■□□□ 1.6
CPNE1-223ENST00000475146 LHX5Q9H2C1 402 aa25.06■■□□□ 1.6
CPNE1-223ENST00000475146 FAM207AQ9NSI2 230 aaPredicted RBP25.06■■□□□ 1.6
CPNE1-223ENST00000475146 TJP2Q9UDY2 1190 aa25.06■■□□□ 1.6
CPNE1-223ENST00000475146 LIMA1Q9UHB6 759 aaKnown RBP25.06■■□□□ 1.6
CPNE1-223ENST00000475146 NAALADL1Q9UQQ1 740 aa25.06■■□□□ 1.6
CPNE1-223ENST00000475146 A0A0A0MRY4 1105 aa25.05■■□□□ 1.6
CPNE1-223ENST00000475146 CAPN9O14815 690 aa25.05■■□□□ 1.6
CPNE1-223ENST00000475146 KLF8O95600 359 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-223ENST00000475146 DGKGP49619 791 aa25.05■■□□□ 1.6
CPNE1-223ENST00000475146 SRSF5Q13243 272 aaKnown RBP25.05■■□□□ 1.6
CPNE1-223ENST00000475146 PRR23BQ6ZRT6 265 aa25.05■■□□□ 1.6
CPNE1-223ENST00000475146 CPXM2Q8N436 756 aa25.05■■□□□ 1.6
CPNE1-223ENST00000475146 WDTC1Q8N5D0 677 aa25.05■■□□□ 1.6
CPNE1-223ENST00000475146 CAMKK1Q8N5S9 505 aa25.05■■□□□ 1.6
CPNE1-223ENST00000475146 TSTD1Q8NFU3 115 aa25.05■■□□□ 1.6
CPNE1-223ENST00000475146 DQX1Q8TE96 717 aaKnown RBP25.05■■□□□ 1.6
CPNE1-223ENST00000475146 PPP1R13BQ96KQ4 1090 aa25.05■■□□□ 1.6
CPNE1-223ENST00000475146 CPXM1Q96SM3 734 aa25.05■■□□□ 1.6
CPNE1-223ENST00000475146 STK33Q9BYT3 514 aa25.05■■□□□ 1.6
CPNE1-223ENST00000475146 GANQ9H2C0 597 aa25.05■■□□□ 1.6
CPNE1-223ENST00000475146 ZDHHC4Q9NPG8 344 aa25.05■■□□□ 1.6
CPNE1-223ENST00000475146 RAB23Q9ULC3 237 aa25.05■■□□□ 1.6
CPNE1-223ENST00000475146 MMP17Q9ULZ9 603 aa25.05■■□□□ 1.6
CPNE1-223ENST00000475146 ZFHX2Q9C0A1 2572 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-223ENST00000475146 LGALS16A8MUM7 142 aa25.04■■□□□ 1.6
CPNE1-223ENST00000475146 F8VZ95 297 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms