RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 NOP9Q86U38 636 aaKnown RBP13.48□□□□□ -0.25
COL5A1-206ENST00000465877 SCUBE3Q8IX30 993 aa13.48□□□□□ -0.25
COL5A1-206ENST00000465877 MAML2Q8IZL2 1156 aaPredicted RBP13.48□□□□□ -0.25
COL5A1-206ENST00000465877 SYNPOQ8N3V7 929 aa13.48□□□□□ -0.25
COL5A1-206ENST00000465877 WDTC1Q8N5D0 677 aa13.48□□□□□ -0.25
COL5A1-206ENST00000465877 IPO4Q8TEX9 1081 aaKnown RBP13.48□□□□□ -0.25
COL5A1-206ENST00000465877 ATOH1Q92858 354 aaPredicted RBP13.48□□□□□ -0.25
COL5A1-206ENST00000465877 PPP1R13BQ96KQ4 1090 aa13.48□□□□□ -0.25
COL5A1-206ENST00000465877 SPAG5Q96R06 1193 aa13.48□□□□□ -0.25
COL5A1-206ENST00000465877 DCLK3Q9C098 648 aa13.48□□□□□ -0.25
COL5A1-206ENST00000465877 FBRSL1Q9HCM7 1045 aaKnown RBP13.48□□□□□ -0.25
COL5A1-206ENST00000465877 MARK1Q9P0L2 795 aa13.48□□□□□ -0.25
COL5A1-206ENST00000465877 SFMBT1Q9UHJ3 866 aa13.48□□□□□ -0.25
COL5A1-206ENST00000465877 FBXO4Q9UKT5 387 aa13.48□□□□□ -0.25
COL5A1-206ENST00000465877 ZNF510Q9Y2H8 683 aa13.48□□□□□ -0.25
COL5A1-206ENST00000465877 NEDD8-MDP1E9PL57 170 aa13.47□□□□□ -0.25
COL5A1-206ENST00000465877 TEX33O43247 280 aa13.47□□□□□ -0.25
COL5A1-206ENST00000465877 KLKB1P03952 638 aa13.47□□□□□ -0.25
COL5A1-206ENST00000465877 FYNP06241 537 aa13.47□□□□□ -0.25
COL5A1-206ENST00000465877 NCAM1P13591 858 aa13.47□□□□□ -0.25
COL5A1-206ENST00000465877 CDH5P33151 784 aaPredicted RBP13.47□□□□□ -0.25
COL5A1-206ENST00000465877 SOX5P35711 763 aa13.47□□□□□ -0.25
COL5A1-206ENST00000465877 SATB1Q01826 763 aa13.47□□□□□ -0.25
COL5A1-206ENST00000465877 TRIP4Q15650 581 aaPredicted RBP13.47□□□□□ -0.25
COL5A1-206ENST00000465877 ANO4Q32M45 955 aa13.47□□□□□ -0.25
COL5A1-206ENST00000465877 PKN3Q6P5Z2 889 aa13.47□□□□□ -0.25
COL5A1-206ENST00000465877 FAM183BPQ6ZVS7 135 aa13.47□□□□□ -0.25
COL5A1-206ENST00000465877 LUZP1Q86V48 1076 aa13.47□□□□□ -0.25
COL5A1-206ENST00000465877 TMEM25Q86YD3 366 aa13.47□□□□□ -0.25
COL5A1-206ENST00000465877 DENND1CQ8IV53 801 aa13.47□□□□□ -0.25
COL5A1-206ENST00000465877 ETFBKMTQ8IXQ9 262 aa13.47□□□□□ -0.25
COL5A1-206ENST00000465877 DQX1Q8TE96 717 aaKnown RBP13.47□□□□□ -0.25
COL5A1-206ENST00000465877 SLC20A1Q8WUM9 679 aa13.47□□□□□ -0.25
COL5A1-206ENST00000465877 DDX1Q92499 740 aaKnown RBP13.47□□□□□ -0.25
COL5A1-206ENST00000465877 TRIM62Q9BVG3 475 aa13.47□□□□□ -0.25
COL5A1-206ENST00000465877 PDCL3Q9H2J4 239 aa13.47□□□□□ -0.25
COL5A1-206ENST00000465877 RTN4Q9NQC3 1192 aaKnown RBP13.47□□□□□ -0.25
COL5A1-206ENST00000465877 NOCTQ9UK39 431 aaKnown RBP13.47□□□□□ -0.25
COL5A1-206ENST00000465877 WDR87Q6ZQQ6 2873 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 A0A1B0GTH6 734 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.46□□□□□ -0.25
COL5A1-206ENST00000465877 CACNG3O60359 315 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 LSM8O95777 96 aaKnown RBP13.46□□□□□ -0.25
COL5A1-206ENST00000465877 CAVIN2O95810 425 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 IGLV3-27P01718 113 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 ERBB2P04626 1255 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 MMEP08473 750 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 SP9P0CG40 484 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 STAT1P42224 750 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 TPM4P67936 248 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 NOMO3P69849 1222 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 MESP2Q0VG99 397 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 FBXO43Q4G163 708 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 FILIP1LQ4L180 1135 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 TSSK4Q6SA08 328 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 OLFML1Q6UWY5 402 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 TPGS1Q6ZTW0 290 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 TOGARAM2Q6ZUX3 1019 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 TAC4Q86UU9 113 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 ZNF677Q86XU0 584 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 SPEM1Q8N4L4 309 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 TMEM35BQ8NCS4 154 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 BHMTQ93088 406 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 SERPINB11Q96P15 392 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 PNKPQ96T60 521 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 PHOX2BQ99453 314 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 BBS2Q9BXC9 721 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 SYNCQ9H7C4 482 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 POPDC2Q9HBU9 364 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 ARHGEF4Q9NR80 690 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 AGO1Q9UL18 857 aaKnown RBP13.46□□□□□ -0.25
COL5A1-206ENST00000465877 NAALADL1Q9UQQ1 740 aa13.46□□□□□ -0.25
COL5A1-206ENST00000465877 PLXND1Q9Y4D7 1925 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 CAPN9O14815 690 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 HSF2BPO75031 334 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 TULP3O75386 442 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 PAPSS2O95340 614 aaPredicted RBP13.45□□□□□ -0.26
COL5A1-206ENST00000465877 LATS1O95835 1130 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 APODP05090 189 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 TDGF1P13385 188 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 TYRP14679 529 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 NBL1P41271 181 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 SLC6A11P48066 632 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 HARS2P49590 506 aaKnown RBP13.45□□□□□ -0.26
COL5A1-206ENST00000465877 CSTF1Q05048 431 aaKnown RBP13.45□□□□□ -0.26
COL5A1-206ENST00000465877 RING1Q06587 406 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 NNTQ13423 1086 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 PPP2R5DQ14738 602 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 ZNF528Q3MIS6 628 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 NUGGCQ68CJ6 796 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 MAMSTRQ6ZN01 415 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 BEND5Q7L4P6 421 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 CACNA2D4Q7Z3S7 1137 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 FAM217AQ8IXS0 508 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 PHTF2Q8N3S3 785 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 CPXM2Q8N436 756 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 NAT16Q8N8M0 369 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 TERB1Q8NA31 727 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 RPLP0P6Q8NHW5 317 aa13.45□□□□□ -0.26
COL5A1-206ENST00000465877 DNAJC17Q9NVM6 304 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms