RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ZDHHC4Q9NPG8 344 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 WDR35Q9P2L0 1181 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 APEX2Q9UBZ4 518 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 EBF1Q9UH73 591 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 MYO18AQ92614 2054 aaKnown RBP10.65□□□□□ -0.7
SF3A3-204ENST00000462258 TNRC6BQ9UPQ9 1833 aaKnown RBP10.65□□□□□ -0.71
SF3A3-204ENST00000462258 MUC22E2RYF6 1773 aaPredicted RBP10.65□□□□□ -0.71
SF3A3-204ENST00000462258 NUP205Q92621 2012 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 A0A0A0MRY4 1105 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 LRP3O75074 770 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 KLKB1P03952 638 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 HNRNPLP14866 589 aaKnown RBP eCLIP10.64□□□□□ -0.712e-6■□□□□ 8.9
SF3A3-204ENST00000462258 GNA15P30679 374 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 CHKAP35790 457 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 DGKGP49619 791 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 LMNB2Q03252 620 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 MAN2A1Q16706 1144 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 EXOC3L4Q17RC7 722 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 EOGTQ5NDL2 527 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 EMC10Q5UCC4 262 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 BSPRYQ5W0U4 402 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 PMF1Q6P1K2 205 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 GJB7Q6PEY0 223 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 TMEM92Q6UXU6 159 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 GBP6Q6ZN66 633 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 NUDT18Q6ZVK8 323 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 TRMT11Q7Z4G4 463 aaKnown RBP10.64□□□□□ -0.71
SF3A3-204ENST00000462258 KBTBD6Q86V97 674 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 RASSF3Q86WH2 238 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 IRF2BP1Q8IU81 584 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 DENND1CQ8IV53 801 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 FAM114A1Q8IWE2 563 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 ZNF513Q8N8E2 541 aaPredicted RBP10.64□□□□□ -0.71
SF3A3-204ENST00000462258 MDGA1Q8NFP4 955 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 SLC35F5Q8WV83 523 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 IRGQQ8WZA9 623 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 EDEM1Q92611 657 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 RMDN1Q96DB5 314 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 HSFY1Q96LI6 401 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 FAM81BQ96LP2 452 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 GBP4Q96PP9 640 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 THAP9Q9H5L6 903 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 POLMQ9NP87 494 aaPredicted RBP10.64□□□□□ -0.71
SF3A3-204ENST00000462258 UBE2TQ9NPD8 197 aaPredicted RBP10.64□□□□□ -0.71
SF3A3-204ENST00000462258 ABCC13Q9NSE7 274 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 LMBRD1Q9NUN5 540 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 PLK2Q9NYY3 685 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 AGO1Q9UL18 857 aaKnown RBP10.64□□□□□ -0.71
SF3A3-204ENST00000462258 CNTN6Q9UQ52 1028 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 HBS1LQ9Y450 684 aaKnown RBP10.64□□□□□ -0.71
SF3A3-204ENST00000462258 CACNA1AO00555 2505 aa10.64□□□□□ -0.71
SF3A3-204ENST00000462258 THADAQ6YHU6 1953 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 TCRBV21S2A2A0A5A6 115 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 GTPBP10A4D1E9 387 aaKnown RBP10.63□□□□□ -0.71
SF3A3-204ENST00000462258 MSI1O43347 362 aaKnown RBP10.63□□□□□ -0.71
SF3A3-204ENST00000462258 THAP12O43422 761 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 MED7O43513 233 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 ADAM23O75077 832 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 ALDH1A2O94788 518 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 FBXO21O94952 628 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 EPN2O95208 641 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 PENKP01210 267 aaPredicted RBP10.63□□□□□ -0.71
SF3A3-204ENST00000462258 LTFP02788 710 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 CYBBP04839 570 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 HOXB2P14652 356 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 SLC9A1P19634 815 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 TGM1P22735 817 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 ERCC5P28715 1186 aaPredicted RBP10.63□□□□□ -0.71
SF3A3-204ENST00000462258 MFAP3P55082 362 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 APBA1Q02410 837 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 TRIP4Q15650 581 aaPredicted RBP10.63□□□□□ -0.71
SF3A3-204ENST00000462258 MEA1Q16626 185 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 ARHGAP44Q17R89 818 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 FYB2Q5VWT5 728 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 EGFLAMQ63HQ2 1017 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 MSANTD2Q6P1R3 559 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 TOGARAM2Q6ZUX3 1019 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 FAM217AQ8IXS0 508 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 CPXM2Q8N436 756 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 KCNV2Q8TDN2 545 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 CLEC4CQ8WTT0 213 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 GOLGA1Q92805 767 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 P2RY11Q96G91 374 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 ST7Q9NRC1 585 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 SEMA4GQ9NTN9 838 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 BCCIPQ9P287 314 aaKnown RBP eCLIP10.63□□□□□ -0.71
SF3A3-204ENST00000462258 SFMBT1Q9UHJ3 866 aa10.63□□□□□ -0.71
SF3A3-204ENST00000462258 CKAP5Q14008 2032 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 NYNRINQ9P2P1 1898 aaKnown RBP10.62□□□□□ -0.71
SF3A3-204ENST00000462258 BECN2A8MW95 431 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 PRRT4C9JH25 899 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 DCLK1O15075 740 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 SART1O43290 800 aaKnown RBP10.62□□□□□ -0.71
SF3A3-204ENST00000462258 GABBR2O75899 941 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 LETM1O95202 739 aaPredicted RBP10.62□□□□□ -0.71
SF3A3-204ENST00000462258 LATS1O95835 1130 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 PRKCSHP14314 528 aaPredicted RBP10.62□□□□□ -0.71
SF3A3-204ENST00000462258 PON1P27169 355 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 GBP1P32455 592 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 USP8P40818 1118 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms