RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 DDX1Q92499 740 aaKnown RBP10.55□□□□□ -0.72
RFX3-210ENST00000457373 FAM149B1Q96BN6 582 aa10.55□□□□□ -0.72
RFX3-210ENST00000457373 NOX5Q96PH1 765 aa10.55□□□□□ -0.72
RFX3-210ENST00000457373 CPXM1Q96SM3 734 aa10.55□□□□□ -0.72
RFX3-210ENST00000457373 SYNCQ9H7C4 482 aa10.55□□□□□ -0.72
RFX3-210ENST00000457373 ECT2Q9H8V3 914 aa10.55□□□□□ -0.72
RFX3-210ENST00000457373 LTB4R2Q9NPC1 389 aa10.55□□□□□ -0.72
RFX3-210ENST00000457373 OLA1Q9NTK5 396 aaKnown RBP10.55□□□□□ -0.72
RFX3-210ENST00000457373 MARCH2Q9P0N8 246 aa10.55□□□□□ -0.72
RFX3-210ENST00000457373 LSM7Q9UK45 103 aaKnown RBP10.55□□□□□ -0.72
RFX3-210ENST00000457373 STRIP2Q9ULQ0 834 aa10.55□□□□□ -0.72
RFX3-210ENST00000457373 SIT1Q9Y3P8 196 aa10.55□□□□□ -0.72
RFX3-210ENST00000457373 MTF2Q9Y483 593 aaPredicted RBP10.55□□□□□ -0.72
RFX3-210ENST00000457373 KMT2EQ8IZD2 1858 aa10.55□□□□□ -0.72
RFX3-210ENST00000457373 OTOL1A6NHN0 477 aaPredicted RBP10.54□□□□□ -0.72
RFX3-210ENST00000457373 SHISA7A6NL88 538 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 CAPN9O14815 690 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 SART1O43290 800 aaKnown RBP10.54□□□□□ -0.72
RFX3-210ENST00000457373 NFATC1O95644 943 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 ERBB2P04626 1255 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 NCAM1P13591 858 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 GLULP15104 373 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 FERP16591 822 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 TARSP26639 723 aaKnown RBP10.54□□□□□ -0.72
RFX3-210ENST00000457373 CTHP32929 405 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 GJA4P35212 333 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 CLCN5P51795 746 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 ZNF445P59923 1031 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 COG7P83436 770 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 PON2Q15165 354 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 PTPN20Q4JDL3 420 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 TXNDC11Q6PKC3 985 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 FAM183BPQ6ZVS7 135 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 HTR3DQ70Z44 454 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 RALGPS2Q86X27 583 aaPredicted RBP10.54□□□□□ -0.72
RFX3-210ENST00000457373 ERICH1Q86X53 443 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 ZNF677Q86XU0 584 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 FMNL3Q8IVF7 1028 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 ADGRG2Q8IZP9 1017 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 CPA5Q8WXQ8 436 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 ATP2A3Q93084 1043 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 KCNK17Q96T54 332 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 NELL2Q99435 816 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 DDX23Q9BUQ8 820 aaKnown RBP10.54□□□□□ -0.72
RFX3-210ENST00000457373 XPO4Q9C0E2 1151 aaKnown RBP10.54□□□□□ -0.72
RFX3-210ENST00000457373 SEPT11Q9NVA2 429 aaKnown RBP10.54□□□□□ -0.72
RFX3-210ENST00000457373 TBC1D14Q9P2M4 693 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 NOCTQ9UK39 431 aaKnown RBP10.54□□□□□ -0.72
RFX3-210ENST00000457373 NAALADL1Q9UQQ1 740 aa10.54□□□□□ -0.72
RFX3-210ENST00000457373 MRPS17Q9Y2R5 130 aaKnown RBP10.54□□□□□ -0.72
RFX3-210ENST00000457373 LRRC53A6NM62 1247 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 NCAM2O15394 837 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 GRAP2O75791 330 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 STC2O76061 302 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 CYP17A1P05093 508 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 FYNP06241 537 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 CCDC172P0C7W6 258 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 CHRNB2P17787 502 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 CDH5P33151 784 aaPredicted RBP10.53□□□□□ -0.72
RFX3-210ENST00000457373 GALK1P51570 392 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 MLLT6P55198 1093 aaPredicted RBP10.53□□□□□ -0.72
RFX3-210ENST00000457373 SNX16P57768 344 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 AMPD2Q01433 879 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 FMO1Q01740 532 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 CDR2Q01850 454 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 DHCR24Q15392 516 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 TAF5Q15542 800 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 C2CD6Q53TS8 623 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 SYPL2Q5VXT5 272 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 NAA35Q5VZE5 725 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 RHBDF2Q6PJF5 856 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 DEFB106AQ8N104 65 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 PJA1Q8NG27 643 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 CPLX3Q8WVH0 158 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 BAP1Q92560 729 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 MSANTD3Q96H12 275 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 PIWIL1Q96J94 861 aaKnown RBP10.53□□□□□ -0.72
RFX3-210ENST00000457373 AGPAT1Q99943 283 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 NUP58Q9BVL2 599 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 LMAN1LQ9HAT1 526 aa10.53□□□□□ -0.72
RFX3-210ENST00000457373 MSI1O43347 362 aaKnown RBP10.52□□□□□ -0.73
RFX3-210ENST00000457373 CBFA2T2O43439 604 aa10.52□□□□□ -0.73
RFX3-210ENST00000457373 GREM1O60565 184 aa10.52□□□□□ -0.73
RFX3-210ENST00000457373 CYP1A1P04798 512 aaPredicted RBP10.52□□□□□ -0.73
RFX3-210ENST00000457373 TNFAIP3P21580 790 aa10.52□□□□□ -0.73
RFX3-210ENST00000457373 CORO1AP31146 461 aaKnown RBP10.52□□□□□ -0.73
RFX3-210ENST00000457373 PBX1P40424 430 aa10.52□□□□□ -0.73
RFX3-210ENST00000457373 SLC6A11P48066 632 aa10.52□□□□□ -0.73
RFX3-210ENST00000457373 TBX4P57082 545 aa10.52□□□□□ -0.73
RFX3-210ENST00000457373 YWHAZP63104 245 aaKnown RBP10.52□□□□□ -0.73
RFX3-210ENST00000457373 NOMO3P69849 1222 aa10.52□□□□□ -0.73
RFX3-210ENST00000457373 SLC6A3Q01959 620 aa10.52□□□□□ -0.73
RFX3-210ENST00000457373 GAD2Q05329 585 aa10.52□□□□□ -0.73
RFX3-210ENST00000457373 ASIC2Q16515 512 aa10.52□□□□□ -0.73
RFX3-210ENST00000457373 ANO4Q32M45 955 aa10.52□□□□□ -0.73
RFX3-210ENST00000457373 EFHC1Q5JVL4 640 aa10.52□□□□□ -0.73
RFX3-210ENST00000457373 LY6G5CQ5SRR4 150 aa10.52□□□□□ -0.73
RFX3-210ENST00000457373 SFMBT2Q5VUG0 894 aa10.52□□□□□ -0.73
RFX3-210ENST00000457373 NAIF1Q69YI7 327 aaPredicted RBP10.52□□□□□ -0.73
RFX3-210ENST00000457373 C1orf228Q6PIY5 440 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms