RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 NETO2Q8NC67 525 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 OXCT2Q9BYC2 517 aaPredicted RBP17.19■□□□□ 0.34
PKP4-204ENST00000421462 ZDHHC7Q9NXF8 308 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 ARHGEF38Q9NXL2 777 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 PPME1Q9Y570 386 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 COL24A1Q17RW2 1714 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 DNAJA2O60884 412 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 TNFSF9P41273 254 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 WASHC5Q12768 1159 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 FAM91A1Q658Y4 838 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 LRRC8BQ6P9F7 803 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 C10orf107Q8IVU9 208 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 SP8Q8IXZ3 490 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 C1orf21Q9H246 121 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 MAGED2Q9UNF1 606 aaPredicted RBP17.19■□□□□ 0.34
PKP4-204ENST00000421462 COL14A1Q05707 1796 aaKnown RBP17.19■□□□□ 0.34
PKP4-204ENST00000421462 KLHL2O95198 593 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 KRT19P08727 400 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 GARTP22102 1010 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 TFAMQ00059 246 aaKnown RBP17.19■□□□□ 0.34
PKP4-204ENST00000421462 PPIDQ08752 370 aaKnown RBP17.19■□□□□ 0.34
PKP4-204ENST00000421462 ITGA9Q13797 1035 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 KLC3Q6P597 504 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 RMDN3Q96TC7 470 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 ANLNQ9NQW6 1124 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 FAF1Q9UNN5 650 aaPredicted RBP17.19■□□□□ 0.34
PKP4-204ENST00000421462 HMX2A2RU54 273 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 APOC4-APOC2K7ER74 178 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 CCNT2O60583 730 aaKnown RBP17.18■□□□□ 0.34
PKP4-204ENST00000421462 ZBED1O96006 694 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 APOC2P02655 101 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 ADORA2AP29274 412 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 IDH3AP50213 366 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 RPS6P62753 249 aaKnown RBP17.18■□□□□ 0.34
PKP4-204ENST00000421462 KRT81Q14533 505 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 TMEM259Q4ZIN3 620 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 MAVSQ7Z434 540 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 HACE1Q8IYU2 909 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 TNS4Q8IZW8 715 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 PQLC1Q8N2U9 271 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 FBXW8Q8N3Y1 598 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 PGLYRP2Q96PD5 576 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 SF3B1O75533 1304 aaKnown RBP eCLIP17.18■□□□□ 0.342e-6■■■■■ 97.4
PKP4-204ENST00000421462 H3BNX3 289 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 K7ERI5 159 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 FOXD2O60548 495 aaPredicted RBP17.18■□□□□ 0.34
PKP4-204ENST00000421462 SNNO75324 88 aaPredicted RBP17.18■□□□□ 0.34
PKP4-204ENST00000421462 APOEP02649 317 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 CDH8P55286 799 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 HDAC4P56524 1084 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 TBCCQ15814 346 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 PPM1LQ5SGD2 360 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 TEDDM1Q5T9Z0 273 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 CC2D2BQ6DHV5 1058 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 CDR2LQ86X02 465 aaPredicted RBP17.18■□□□□ 0.34
PKP4-204ENST00000421462 FAM156AQ8NDB6 213 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 GSDMBQ8TAX9 411 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 CATSPER2Q96P56 530 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 POPDC2Q9HBU9 364 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 GNEQ9Y223 722 aaKnown RBP17.18■□□□□ 0.34
PKP4-204ENST00000421462 TMX2Q9Y320 296 aa17.18■□□□□ 0.34
PKP4-204ENST00000421462 TBXAS1P24557 533 aaPredicted RBP17.17■□□□□ 0.34
PKP4-204ENST00000421462 MYBPC1Q00872 1141 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 KCNJ11Q14654 390 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 C15orf59Q2T9L4 293 aaPredicted RBP17.17■□□□□ 0.34
PKP4-204ENST00000421462 RTKN2Q8IZC4 609 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 ZNF513Q8N8E2 541 aaPredicted RBP17.17■□□□□ 0.34
PKP4-204ENST00000421462 CERKQ8TCT0 537 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 TMIGD2Q96BF3 282 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 SEMA6AQ9H2E6 1030 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 CYTH4Q9UIA0 394 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 USP18Q9UMW8 372 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 PDLIM1O00151 329 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 ABCG1P45844 678 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 SH3BGRP55822 239 aaPredicted RBP17.17■□□□□ 0.34
PKP4-204ENST00000421462 TUBB3Q13509 450 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 SH3D19Q5HYK7 790 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 CES3Q6UWW8 571 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 ZBTB46Q86UZ6 589 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 CAND1Q86VP6 1230 aaKnown RBP17.17■□□□□ 0.34
PKP4-204ENST00000421462 ZSCAN18Q8TBC5 510 aaPredicted RBP17.17■□□□□ 0.34
PKP4-204ENST00000421462 CMTM5Q96DZ9 223 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 BOLA2-SMG1P6H3BVE0 249 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 ATP9BO43861 1147 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 ENO3P13929 434 aaPredicted RBP17.17■□□□□ 0.34
PKP4-204ENST00000421462 FUT4P22083 530 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 FGFR3P22607 806 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 SLC5A2P31639 672 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 SNAPC2Q13487 334 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 TRPC3Q13507 836 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 ARHGEF16Q5VV41 709 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 ADGRG6Q86SQ4 1221 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 TRIML2Q8N7C3 387 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 GRIN3AQ8TCU5 1115 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 ACTRT2Q8TDY3 377 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 CPXM1Q96SM3 734 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 CDRT15Q96T59 188 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 IDI2Q9BXS1 227 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 Q9H521 79 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 NDUFA13Q9P0J0 144 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms