RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 PLA2G4AP47712 749 aa14.52□□□□□ -0.09
CXCL12-202ENST00000374426 KIF11P52732 1056 aa14.52□□□□□ -0.09
CXCL12-202ENST00000374426 C10orf120Q5SQS8 335 aa14.52□□□□□ -0.09
CXCL12-202ENST00000374426 CEP135Q66GS9 1140 aa14.52□□□□□ -0.09
CXCL12-202ENST00000374426 SCD5Q86SK9 330 aa14.52□□□□□ -0.09
CXCL12-202ENST00000374426 CYFIP2Q96F07 1278 aa14.52□□□□□ -0.09
CXCL12-202ENST00000374426 NT5C1AQ9BXI3 368 aa14.52□□□□□ -0.09
CXCL12-202ENST00000374426 APOBEC3GQ9HC16 384 aaKnown RBP14.52□□□□□ -0.09
CXCL12-202ENST00000374426 GJB3O75712 270 aa14.51□□□□□ -0.09
CXCL12-202ENST00000374426 F13A1P00488 732 aa14.51□□□□□ -0.09
CXCL12-202ENST00000374426 KLKB1P03952 638 aa14.51□□□□□ -0.09
CXCL12-202ENST00000374426 SYPP08247 313 aa14.51□□□□□ -0.09
CXCL12-202ENST00000374426 FUT11Q495W5 492 aa14.51□□□□□ -0.09
CXCL12-202ENST00000374426 KIAA1324Q6UXG2 1013 aaKnown RBP14.51□□□□□ -0.09
CXCL12-202ENST00000374426 CCDC186Q7Z3E2 898 aa14.51□□□□□ -0.09
CXCL12-202ENST00000374426 CHCHD4Q8N4Q1 142 aa14.51□□□□□ -0.09
CXCL12-202ENST00000374426 TAS1R2Q8TE23 839 aa14.51□□□□□ -0.09
CXCL12-202ENST00000374426 FAM124BQ9H5Z6 455 aaPredicted RBP14.51□□□□□ -0.09
CXCL12-202ENST00000374426 CYP3A43Q9HB55 503 aa14.51□□□□□ -0.09
CXCL12-202ENST00000374426 NAGPAQ9UK23 515 aa14.51□□□□□ -0.09
CXCL12-202ENST00000374426 FRMD4BQ9Y2L6 1034 aa14.51□□□□□ -0.09
CXCL12-202ENST00000374426 STON1Q9Y6Q2 735 aa14.51□□□□□ -0.09
CXCL12-202ENST00000374426 LOC400499M0QZD8 3231 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 FAM221BA6H8Z2 402 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 H0Y626 953 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 NDUFS2O75306 463 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 CILPO75339 1184 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 TRIM16O95361 564 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 PENKP01210 267 aaPredicted RBP14.5□□□□□ -0.09
CXCL12-202ENST00000374426 TRIM49P0CI25 452 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 TRIM49CP0CI26 452 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 PDIA4P13667 645 aaKnown RBP14.5□□□□□ -0.09
CXCL12-202ENST00000374426 TRIM21P19474 475 aaKnown RBP14.5□□□□□ -0.09
CXCL12-202ENST00000374426 MAOBP27338 520 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 CD6P30203 668 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 VAMP7P51809 220 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 MFAP3P55082 362 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 PPP3CAQ08209 521 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 PKP1Q13835 747 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 PLEKHG6Q3KR16 790 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 FYB2Q5VWT5 728 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 ATL3Q6DD88 541 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 RGL4Q8IZJ4 473 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 ZNF276Q8N554 614 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 FOXJ1Q92949 421 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 CAMK1GQ96NX5 476 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 NIF3L1Q9GZT8 377 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 MKRN2Q9H000 416 aaKnown RBP14.5□□□□□ -0.09
CXCL12-202ENST00000374426 CLIC5Q9NZA1 410 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 USP36Q9P275 1121 aaKnown RBP14.5□□□□□ -0.09
CXCL12-202ENST00000374426 SUSD2Q9UGT4 822 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 RCOR1Q9UKL0 485 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 TRAF3IP3Q9Y228 551 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 SLC27A6Q9Y2P4 619 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 USP3Q9Y6I4 520 aa14.5□□□□□ -0.09
CXCL12-202ENST00000374426 APC2O95996 2303 aa14.49□□□□□ -0.09
CXCL12-202ENST00000374426 ACACAQ13085 2346 aa14.49□□□□□ -0.09
CXCL12-202ENST00000374426 SMG1Q96Q15 3661 aaKnown RBP14.49□□□□□ -0.09
CXCL12-202ENST00000374426 MAPK13O15264 365 aa14.49□□□□□ -0.09
CXCL12-202ENST00000374426 SH3BP5O60239 455 aa14.49□□□□□ -0.09
CXCL12-202ENST00000374426 HOXB3P14651 431 aaPredicted RBP14.49□□□□□ -0.09
CXCL12-202ENST00000374426 CD58P19256 250 aa14.49□□□□□ -0.09
CXCL12-202ENST00000374426 GCLMP48507 274 aa14.49□□□□□ -0.09
CXCL12-202ENST00000374426 PSEN1P49768 467 aa14.49□□□□□ -0.09
CXCL12-202ENST00000374426 DNM1Q05193 864 aaKnown RBP14.49□□□□□ -0.09
CXCL12-202ENST00000374426 SLC14A1Q13336 389 aa14.49□□□□□ -0.09
CXCL12-202ENST00000374426 ENPP2Q13822 863 aa14.49□□□□□ -0.09
CXCL12-202ENST00000374426 HNRNPDQ14103 355 aaKnown RBP14.49□□□□□ -0.09
CXCL12-202ENST00000374426 GEN1Q17RS7 908 aa14.49□□□□□ -0.09
CXCL12-202ENST00000374426 ZNF423Q2M1K9 1284 aa14.49□□□□□ -0.09
CXCL12-202ENST00000374426 SYCP2LQ5T4T6 812 aa14.49□□□□□ -0.09
CXCL12-202ENST00000374426 PPP1R26Q5T8A7 1209 aaPredicted RBP14.49□□□□□ -0.09
CXCL12-202ENST00000374426 RAB44Q7Z6P3 723 aaPredicted RBP14.49□□□□□ -0.09
CXCL12-202ENST00000374426 TADA2BQ86TJ2 420 aa14.49□□□□□ -0.09
CXCL12-202ENST00000374426 METTL3Q86U44 580 aaKnown RBP14.49□□□□□ -0.09
CXCL12-202ENST00000374426 SNX21Q969T3 373 aa14.49□□□□□ -0.09
CXCL12-202ENST00000374426 TOE1Q96GM8 510 aaKnown RBP14.49□□□□□ -0.09
CXCL12-202ENST00000374426 DUSP16Q9BY84 665 aa14.49□□□□□ -0.09
CXCL12-202ENST00000374426 IMPG2Q9BZV3 1241 aa14.49□□□□□ -0.09
CXCL12-202ENST00000374426 WSB2Q9NYS7 404 aaPredicted RBP14.49□□□□□ -0.09
CXCL12-202ENST00000374426 CFAP45Q9UL16 551 aa14.49□□□□□ -0.09
CXCL12-202ENST00000374426 KCNJ18B7U540 433 aa14.48□□□□□ -0.09
CXCL12-202ENST00000374426 CALUO43852 315 aaPredicted RBP14.48□□□□□ -0.09
CXCL12-202ENST00000374426 KIF20AO95235 890 aa14.48□□□□□ -0.09
CXCL12-202ENST00000374426 CAPNS1P04632 268 aa14.48□□□□□ -0.09
CXCL12-202ENST00000374426 RALAP11233 206 aa14.48□□□□□ -0.09
CXCL12-202ENST00000374426 GNSP15586 552 aa14.48□□□□□ -0.09
CXCL12-202ENST00000374426 PFKFB1P16118 471 aa14.48□□□□□ -0.09
CXCL12-202ENST00000374426 NR2F2P24468 414 aa14.48□□□□□ -0.09
CXCL12-202ENST00000374426 RDXP35241 583 aaKnown RBP14.48□□□□□ -0.09
CXCL12-202ENST00000374426 IL12RB1P42701 662 aa14.48□□□□□ -0.09
CXCL12-202ENST00000374426 COG7P83436 770 aa14.48□□□□□ -0.09
CXCL12-202ENST00000374426 EFEMP1Q12805 493 aa14.48□□□□□ -0.09
CXCL12-202ENST00000374426 GRIK2Q13002 908 aa14.48□□□□□ -0.09
CXCL12-202ENST00000374426 STARD3Q14849 445 aa14.48□□□□□ -0.09
CXCL12-202ENST00000374426 TRIP6Q15654 476 aaKnown RBP14.48□□□□□ -0.09
CXCL12-202ENST00000374426 WDR45BQ5MNZ6 344 aa14.48□□□□□ -0.09
CXCL12-202ENST00000374426 INTS8Q75QN2 995 aaKnown RBP14.48□□□□□ -0.09
CXCL12-202ENST00000374426 DNASE2BQ8WZ79 361 aa14.48□□□□□ -0.09
CXCL12-202ENST00000374426 CDK5RAP1Q96SZ6 601 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms