RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 TPSD1Q9BZJ3 242 aa18.6■□□□□ 0.57
HDDC3-201ENST00000330334 ULBP1Q9BZM6 244 aa18.6■□□□□ 0.57
HDDC3-201ENST00000330334 CNGB3Q9NQW8 809 aa18.6■□□□□ 0.57
HDDC3-201ENST00000330334 RASAL2Q9UJF2 1139 aa18.6■□□□□ 0.57
HDDC3-201ENST00000330334 SLC27A6Q9Y2P4 619 aa18.6■□□□□ 0.57
HDDC3-201ENST00000330334 LAMA1P25391 3075 aa18.6■□□□□ 0.57
HDDC3-201ENST00000330334 RALGAPA1Q6GYQ0 2036 aa18.59■□□□□ 0.57
HDDC3-201ENST00000330334 TULP2O00295 520 aa18.59■□□□□ 0.57
HDDC3-201ENST00000330334 TRIM24O15164 1050 aa18.59■□□□□ 0.57
HDDC3-201ENST00000330334 GDF9O60383 454 aa18.59■□□□□ 0.57
HDDC3-201ENST00000330334 FGFR1OPO95684 399 aaKnown RBP18.59■□□□□ 0.57
HDDC3-201ENST00000330334 GBP1P32455 592 aa18.59■□□□□ 0.57
HDDC3-201ENST00000330334 DGKGP49619 791 aa18.59■□□□□ 0.57
HDDC3-201ENST00000330334 SF3A2Q15428 464 aaKnown RBP18.59■□□□□ 0.57
HDDC3-201ENST00000330334 TRIP4Q15650 581 aaPredicted RBP18.59■□□□□ 0.57
HDDC3-201ENST00000330334 AASDHQ4L235 1098 aaPredicted RBP18.59■□□□□ 0.57
HDDC3-201ENST00000330334 TMEM270Q6UE05 265 aa18.59■□□□□ 0.57
HDDC3-201ENST00000330334 FAM217AQ8IXS0 508 aa18.59■□□□□ 0.57
HDDC3-201ENST00000330334 CPXM2Q8N436 756 aa18.59■□□□□ 0.57
HDDC3-201ENST00000330334 EHBP1Q8NDI1 1231 aa18.59■□□□□ 0.57
HDDC3-201ENST00000330334 SLC35F5Q8WV83 523 aa18.59■□□□□ 0.57
HDDC3-201ENST00000330334 PLD4Q96BZ4 506 aa18.59■□□□□ 0.57
HDDC3-201ENST00000330334 IPO9Q96P70 1041 aaKnown RBP18.59■□□□□ 0.57
HDDC3-201ENST00000330334 AGO1Q9UL18 857 aaKnown RBP18.59■□□□□ 0.57
HDDC3-201ENST00000330334 SPTBN2O15020 2390 aa18.59■□□□□ 0.57
HDDC3-201ENST00000330334 MYO18AQ92614 2054 aaKnown RBP18.58■□□□□ 0.57
HDDC3-201ENST00000330334 DCDC2BA2VCK2 349 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 PRRT4C9JH25 899 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 GFRA2O00451 464 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 CAVIN2O95810 425 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 CORO1AP31146 461 aaKnown RBP18.58■□□□□ 0.56
HDDC3-201ENST00000330334 UBE2HP62256 183 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 KCNH2Q12809 1159 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 FYB2Q5VWT5 728 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 BSPRYQ5W0U4 402 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 SDE2Q6IQ49 451 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 PPM1KQ8N3J5 372 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 UBA3Q8TBC4 463 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 TFAP2BQ92481 460 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 SPACA7Q96KW9 195 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 GABRG3Q99928 467 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 CD248Q9HCU0 757 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 ABCC13Q9NSE7 274 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 CNTN6Q9UQ52 1028 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 CTNND2Q9UQB3 1225 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 INVSQ9Y283 1065 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 HBS1LQ9Y450 684 aaKnown RBP18.58■□□□□ 0.56
HDDC3-201ENST00000330334 PCDHB4Q9Y5E5 795 aa18.58■□□□□ 0.56
HDDC3-201ENST00000330334 A0A1W2PQF6 199 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 TCRBV21S2A2A0A5A6 115 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 SLC12A8A0AV02 714 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 RNF225M0QZC1 329 aaPredicted RBP18.57■□□□□ 0.56
HDDC3-201ENST00000330334 BIN1O00499 593 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 TM4SF5O14894 197 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 NPC1O15118 1278 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 ZNF132P52740 706 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 CREB5Q02930 508 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 ADIGQ0VDE8 80 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 E2F5Q15329 346 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 CCDC6Q16204 474 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 MAP7D1Q3KQU3 841 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 SMYD5Q6GMV2 418 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 TOGARAM2Q6ZUX3 1019 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 SIX6OS1Q8N1H7 587 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 HMGB4Q8WW32 186 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 IRGQQ8WZA9 623 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 HSFY1Q96LI6 401 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 SRRTQ9BXP5 876 aaKnown RBP18.57■□□□□ 0.56
HDDC3-201ENST00000330334 SLC2A11Q9BYW1 496 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 KIAA1468Q9P260 1216 aa18.57■□□□□ 0.56
HDDC3-201ENST00000330334 BCCIPQ9P287 314 aaKnown RBP eCLIP18.57■□□□□ 0.56
HDDC3-201ENST00000330334 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.57■□□□□ 0.56
HDDC3-201ENST00000330334 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.57■□□□□ 0.56
HDDC3-201ENST00000330334 ABCA7Q8IZY2 2146 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 YJEFN3A6XGL0 299 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 E7ENQ6 273 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 ZBTB24O43167 697 aaPredicted RBP18.56■□□□□ 0.56
HDDC3-201ENST00000330334 LATS1O95835 1130 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 AFPP02771 609 aaKnown RBP18.56■□□□□ 0.56
HDDC3-201ENST00000330334 CYBBP04839 570 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 HOXB2P14652 356 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 BCKDHBP21953 392 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 HARS2P49590 506 aaKnown RBP18.56■□□□□ 0.56
HDDC3-201ENST00000330334 DAOAP59103 153 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 ZNF445P59923 1031 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 EGFLAMQ63HQ2 1017 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 LPCAT2Q7L5N7 544 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 DENND1CQ8IV53 801 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 CHPFQ8IZ52 775 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 RNF139Q8WU17 664 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 KAT5Q92993 513 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 P2RY11Q96G91 374 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 ZSWIM1Q9BR11 485 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 ZDHHC4Q9NPG8 344 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 RXFP3Q9NSD7 469 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 RWDD2AQ9UIY3 292 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 STOML2Q9UJZ1 356 aa18.56■□□□□ 0.56
HDDC3-201ENST00000330334 HMBSP08397 361 aa18.55■□□□□ 0.56
HDDC3-201ENST00000330334 GABRG2P18507 467 aa18.55■□□□□ 0.56
HDDC3-201ENST00000330334 DPP6P42658 865 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms