RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 CYP24A1Q07973 514 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 CBX3Q13185 183 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 CLNKQ7Z7G1 428 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 SLC47A2Q86VL8 602 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 ZC3H3Q8IXZ2 948 aaKnown RBP10.72□□□□□ -0.69
ABCF1-201ENST00000326195 ZNF516Q92618 1163 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 SEMA4DQ92854 862 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 ZSWIM1Q9BR11 485 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 DDX43Q9NXZ2 648 aaKnown RBP10.72□□□□□ -0.69
ABCF1-201ENST00000326195 NKIRAS1Q9NYS0 192 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 ZFP69BQ9UJL9 534 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 DCTN4Q9UJW0 460 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 CFAP69A5D8W1 941 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 P4HA2O15460 535 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 ASMTLO95671 621 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 LMNAP02545 664 aaKnown RBP10.72□□□□□ -0.69
ABCF1-201ENST00000326195 KAZNQ674X7 775 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 ARHGEF18Q6ZSZ5 1173 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 PASD1Q8IV76 773 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 ARL10Q8N8L6 244 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 SHKBP1Q8TBC3 707 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 TMEM117Q9H0C3 514 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 EBF3Q9H4W6 596 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 NPHS2Q9NP85 383 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 RAB20Q9NX57 234 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 STX18Q9P2W9 335 aaKnown RBP10.72□□□□□ -0.69
ABCF1-201ENST00000326195 PCDHB4Q9Y5E5 795 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 COL1A2P08123 1366 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 TNNC2P02585 160 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 ATF7P17544 494 aaPredicted RBP10.72□□□□□ -0.69
ABCF1-201ENST00000326195 OVGP1Q12889 678 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 CCDC142Q17RM4 750 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 DCUN1D2Q6PH85 259 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 SPRED2Q7Z698 418 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 FBXO27Q8NI29 283 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.72□□□□□ -0.69
ABCF1-201ENST00000326195 SEPT8Q92599 483 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 GRAMD1AQ96CP6 724 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 FAM161BQ96MY7 647 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 INIPQ9NRY2 104 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 DDX18Q9NVP1 670 aaKnown RBP10.72□□□□□ -0.69
ABCF1-201ENST00000326195 PCYOX1Q9UHG3 505 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 PCDHB7Q9Y5E2 793 aa10.72□□□□□ -0.69
ABCF1-201ENST00000326195 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.72□□□□□ -0.69
ABCF1-201ENST00000326195 C2orf71A6NGG8 1288 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 HLA-DRAP01903 254 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 MYOGP15173 224 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 ACAT1P24752 427 aaKnown RBP10.71□□□□□ -0.69
ABCF1-201ENST00000326195 VARSP26640 1264 aaKnown RBP10.71□□□□□ -0.69
ABCF1-201ENST00000326195 SERPINB3P29508 390 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 TMEM132DQ14C87 1099 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 CFAP157Q5JU67 520 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 MARK2Q7KZI7 788 aaKnown RBP10.71□□□□□ -0.69
ABCF1-201ENST00000326195 NLRP9Q7RTR0 991 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 ZNF280BQ86YH2 543 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 RFWD2Q8NHY2 731 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 MIPOL1Q8TD10 442 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 GRK7Q8WTQ7 553 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 TMEM134Q9H6X4 195 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 TNFSF13BQ9Y275 285 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 TDRKHQ9Y2W6 561 aaKnown RBP10.71□□□□□ -0.69
ABCF1-201ENST00000326195 BRWD1Q9NSI6 2320 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 HNRNPCP07910 306 aaKnown RBP eCLIP10.71□□□□□ -0.69
ABCF1-201ENST00000326195 PYGMP11217 842 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 BRCC3P46736 316 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 GALK1P51570 392 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 HPCAP84074 193 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 MYBPC2Q14324 1141 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 LRRC36Q1X8D7 754 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.71□□□□□ -0.69
ABCF1-201ENST00000326195 CAPN12Q6ZSI9 719 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 OTOAQ7RTW8 1153 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 LINC01465Q8N7H1 131 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 DDX27Q96GQ7 796 aaKnown RBP10.71□□□□□ -0.69
ABCF1-201ENST00000326195 BTBD10Q9BSF8 475 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 C12orf65Q9H3J6 166 aaKnown RBP10.71□□□□□ -0.69
ABCF1-201ENST00000326195 ANAPC5Q9UJX4 755 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 GMEB1Q9Y692 573 aa10.71□□□□□ -0.69
ABCF1-201ENST00000326195 RASA4BC9J798 803 aa10.71□□□□□ -0.7
ABCF1-201ENST00000326195 RASA4O43374 803 aa10.71□□□□□ -0.7
ABCF1-201ENST00000326195 EDF1O60869 148 aaKnown RBP10.71□□□□□ -0.7
ABCF1-201ENST00000326195 STK10O94804 968 aaKnown RBP10.71□□□□□ -0.7
ABCF1-201ENST00000326195 TMCC1O94876 653 aa10.71□□□□□ -0.7
ABCF1-201ENST00000326195 IFNB1P01574 187 aa10.71□□□□□ -0.7
ABCF1-201ENST00000326195 NCOA4Q13772 614 aa10.71□□□□□ -0.7
ABCF1-201ENST00000326195 TSHZ1Q6ZSZ6 1077 aa10.71□□□□□ -0.7
ABCF1-201ENST00000326195 SLC13A5Q86YT5 568 aaPredicted RBP10.71□□□□□ -0.7
ABCF1-201ENST00000326195 HOMEZQ8IX15 550 aa10.71□□□□□ -0.7
ABCF1-201ENST00000326195 ARHGAP18Q8N392 663 aa10.71□□□□□ -0.7
ABCF1-201ENST00000326195 NME8Q8N427 588 aa10.71□□□□□ -0.7
ABCF1-201ENST00000326195 SMG8Q8ND04 991 aaKnown RBP10.71□□□□□ -0.7
ABCF1-201ENST00000326195 CPA5Q8WXQ8 436 aa10.71□□□□□ -0.7
ABCF1-201ENST00000326195 NR1H4Q96RI1 486 aaPredicted RBP10.71□□□□□ -0.7
ABCF1-201ENST00000326195 YME1L1Q96TA2 773 aa10.71□□□□□ -0.7
ABCF1-201ENST00000326195 CYTH2Q99418 400 aa10.71□□□□□ -0.7
ABCF1-201ENST00000326195 C11orf70Q9BRQ4 267 aa10.71□□□□□ -0.7
ABCF1-201ENST00000326195 CRISPLD2Q9H0B8 497 aa10.71□□□□□ -0.7
ABCF1-201ENST00000326195 SYNCQ9H7C4 482 aa10.71□□□□□ -0.7
ABCF1-201ENST00000326195 TAS2R1Q9NYW7 299 aa10.71□□□□□ -0.7
ABCF1-201ENST00000326195 DNAJB4Q9UDY4 337 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms