RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 APBB2Q92870 758 aa17.29■□□□□ 0.36
LMNB2-201ENST00000325327 ST6GALNAC4Q9H4F1 302 aa17.29■□□□□ 0.36
LMNB2-201ENST00000325327 DMGDHQ9UI17 866 aaKnown RBP17.29■□□□□ 0.36
LMNB2-201ENST00000325327 NAALADL1Q9UQQ1 740 aa17.29■□□□□ 0.36
LMNB2-201ENST00000325327 MAGEA4P43358 317 aa17.29■□□□□ 0.36
LMNB2-201ENST00000325327 GATMP50440 423 aa17.29■□□□□ 0.36
LMNB2-201ENST00000325327 TMC5Q6UXY8 1006 aa17.29■□□□□ 0.36
LMNB2-201ENST00000325327 ADCK2Q7Z695 626 aa17.29■□□□□ 0.36
LMNB2-201ENST00000325327 TOP6BLQ8N6T0 577 aa17.29■□□□□ 0.36
LMNB2-201ENST00000325327 CPXM1Q96SM3 734 aa17.29■□□□□ 0.36
LMNB2-201ENST00000325327 TMEM161AQ9NX61 479 aa17.29■□□□□ 0.36
LMNB2-201ENST00000325327 FLRT1Q9NZU1 646 aa17.29■□□□□ 0.36
LMNB2-201ENST00000325327 Q9Y3F1 56 aa17.29■□□□□ 0.36
LMNB2-201ENST00000325327 PPEF2O14830 753 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 ANXA9O76027 345 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 TAC1P20366 129 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 PTPN20Q4JDL3 420 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 ZDHHC17Q8IUH5 632 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 TNS4Q8IZW8 715 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 SNX27Q96L92 541 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 SGIP1Q9BQI5 828 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 TBC1D13Q9NVG8 400 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 CNMDO75829 334 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 TCEA2Q15560 299 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 KCNT2Q6UVM3 1135 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 JOSD2Q8TAC2 188 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 SGF29Q96ES7 293 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 SPATA17Q96L03 361 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 A0A0G2JND7 137 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 PPP2R2DQ66LE6 453 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 SZRD1Q7Z422 152 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 IRF2BP2Q7Z5L9 587 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 EXOC2Q96KP1 924 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 TBCBQ99426 244 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 ZMYM2Q9UBW7 1377 aa17.28■□□□□ 0.36
LMNB2-201ENST00000325327 OR6C75A6NL08 312 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 PARNO95453 639 aaKnown RBP17.27■□□□□ 0.36
LMNB2-201ENST00000325327 TPD52P55327 224 aaPredicted RBP17.27■□□□□ 0.36
LMNB2-201ENST00000325327 STX1BP61266 288 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 POU6F1Q14863 301 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 CFAP52Q8N1V2 620 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 DUSP16Q9BY84 665 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.27■□□□□ 0.362e-6■■■□□ 19.2
LMNB2-201ENST00000325327 POLBP06746 335 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 ZNF865P0CJ78 1059 aaPredicted RBP17.27■□□□□ 0.36
LMNB2-201ENST00000325327 MMRN1Q13201 1228 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 PDAP1Q13442 181 aaKnown RBP17.27■□□□□ 0.36
LMNB2-201ENST00000325327 GTF2H3Q13889 308 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 ZCWPW2Q504Y3 356 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 MROH9Q5TGP6 573 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 GET4Q7L5D6 327 aaPredicted RBP17.27■□□□□ 0.36
LMNB2-201ENST00000325327 SPPL2BQ8TCT7 592 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 CSGALNACT1Q8TDX6 532 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 FICDQ9BVA6 458 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 TLR10Q9BXR5 811 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 AGO3Q9H9G7 860 aaKnown RBP17.27■□□□□ 0.36
LMNB2-201ENST00000325327 APOBEC3GQ9HC16 384 aaKnown RBP17.27■□□□□ 0.36
LMNB2-201ENST00000325327 SCUBE2Q9NQ36 999 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 DNMT3LQ9UJW3 386 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 TRAV19A0A0A6YYK7 116 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 RCCD1A6NED2 376 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 NRP1O14786 923 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 RNASEH1O60930 286 aaKnown RBP17.27■□□□□ 0.36
LMNB2-201ENST00000325327 TGM2P21980 687 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 PRKCIP41743 596 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 MARCKSL1P49006 195 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 CCDC85BQ15834 202 aaPredicted RBP17.27■□□□□ 0.36
LMNB2-201ENST00000325327 SYTL3Q4VX76 610 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 FBXO25Q8TCJ0 367 aa17.27■□□□□ 0.36
LMNB2-201ENST00000325327 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.27■□□□□ 0.36
LMNB2-201ENST00000325327 LAMB4A4D0S4 1761 aa17.27■□□□□ 0.35
LMNB2-201ENST00000325327 ZSCAN5CA6NGD5 496 aaPredicted RBP17.27■□□□□ 0.35
LMNB2-201ENST00000325327 CENPCQ03188 943 aa17.27■□□□□ 0.35
LMNB2-201ENST00000325327 MEA1Q16626 185 aa17.27■□□□□ 0.35
LMNB2-201ENST00000325327 MEI1Q5TIA1 1274 aa17.27■□□□□ 0.35
LMNB2-201ENST00000325327 NYAP1Q6ZVC0 841 aa17.27■□□□□ 0.35
LMNB2-201ENST00000325327 SH2D3CQ8N5H7 860 aa17.27■□□□□ 0.35
LMNB2-201ENST00000325327 COLGALT1Q8NBJ5 622 aa17.27■□□□□ 0.35
LMNB2-201ENST00000325327 PCED1BQ96HM7 432 aa17.27■□□□□ 0.35
LMNB2-201ENST00000325327 ELMO2Q96JJ3 720 aa17.27■□□□□ 0.35
LMNB2-201ENST00000325327 PPP1R36Q96LQ0 422 aa17.27■□□□□ 0.35
LMNB2-201ENST00000325327 UBXN6Q9BZV1 441 aa17.27■□□□□ 0.35
LMNB2-201ENST00000325327 DCTN4Q9UJW0 460 aa17.27■□□□□ 0.35
LMNB2-201ENST00000325327 SIGLEC16A6NMB1 481 aa17.26■□□□□ 0.35
LMNB2-201ENST00000325327 MNAT1P51948 309 aa17.26■□□□□ 0.35
LMNB2-201ENST00000325327 FBXO46Q6PJ61 603 aaPredicted RBP17.26■□□□□ 0.35
LMNB2-201ENST00000325327 LPCAT1Q8NF37 534 aa17.26■□□□□ 0.35
LMNB2-201ENST00000325327 MCRS1Q96EZ8 462 aa17.26■□□□□ 0.35
LMNB2-201ENST00000325327 STAMBPL1Q96FJ0 436 aa17.26■□□□□ 0.35
LMNB2-201ENST00000325327 TRIM54Q9BYV2 358 aa17.26■□□□□ 0.35
LMNB2-201ENST00000325327 RRN3Q9NYV6 651 aa17.26■□□□□ 0.35
LMNB2-201ENST00000325327 MPP6Q9NZW5 540 aa17.26■□□□□ 0.35
LMNB2-201ENST00000325327 CPSF2Q9P2I0 782 aaKnown RBP17.26■□□□□ 0.35
LMNB2-201ENST00000325327 MAP3K13O43283 966 aa17.26■□□□□ 0.35
LMNB2-201ENST00000325327 SERPIND1P05546 499 aa17.26■□□□□ 0.35
LMNB2-201ENST00000325327 TMCO2Q7Z6W1 182 aaPredicted RBP17.26■□□□□ 0.35
LMNB2-201ENST00000325327 NT5DC3Q86UY8 548 aa17.26■□□□□ 0.35
LMNB2-201ENST00000325327 C10orf67Q8IYJ2 551 aa17.26■□□□□ 0.35
LMNB2-201ENST00000325327 PCDHB18PQ96TA0 734 aa17.26■□□□□ 0.35
LMNB2-201ENST00000325327 SNRNP25Q9BV90 132 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms